RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	PRAMEF2	O60811	474 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	AGFG2	O95081	481 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	WDPCP	O95876	746 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	CRYAB	P02511	175 aa	Known RBP	11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	ALDOA	P04075	364 aa	Known RBP	11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	CELA2A	P08217	269 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	RBP1	P09455	135 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	HNRNPH1	P31943	449 aa	Known RBP	11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	PIK3CB	P42338	1070 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	MAGEA12	P43365	314 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	OLR1	P78380	273 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	ZNF33B	Q06732	778 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	PCBP2	Q15366	365 aa	Known RBP eCLIP	11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	NR6A1	Q15406	480 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	TSNAXIP1	Q2TAA8	658 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	C10orf62	Q5T681	223 aa	Predicted RBP	11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	LGSN	Q5TDP6	509 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	PRAMEF9	Q5VWM5	478 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	ZNF324B	Q6AW86	544 aa	Predicted RBP	11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	GRHL2	Q6ISB3	625 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	VN1R5	Q7Z5H4	357 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	SCUBE1	Q8IWY4	988 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	IFT20	Q8IY31	132 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	CATSPER1	Q8NEC5	780 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	ZNF473	Q8WTR7	871 aa	Known RBP	11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	SSC4D	Q8WTU2	575 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	KCTD4	Q8WVF5	259 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	TSLP	Q969D9	159 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	REPS1	Q96D71	796 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	SLX1A	Q9BQ83	275 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	CENPK	Q9BS16	269 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	RBCK1	Q9BYM8	510 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	AICDA	Q9GZX7	198 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	COPS7B	Q9H9Q2	264 aa	Predicted RBP	11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	LYRM4	Q9HD34	91 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	PSD3	Q9NYI0	1048 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	NTNG1	Q9Y2I2	539 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	PCDHGA11	Q9Y5H2	935 aa		11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	SPEN	Q96T58	3664 aa	Known RBP	11.81	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708		A0A087WUV0	522 aa	Predicted RBP	11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	OR2W5	A6NFC9	320 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708		A8MUI8	341 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	C4orf51	C9J302	202 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	DNAJB6	O75190	326 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	SCEL	O95171	688 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	ACSL3	O95573	720 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	TBX6	O95947	436 aa	Predicted RBP	11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	B3GALT4	O96024	378 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	ABHD2	P08910	425 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	GP1BB	P13224	206 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	GFAP	P14136	432 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	CD22	P20273	847 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	ECHS1	P30084	290 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	MSH2	P43246	934 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	PLA2G16	P53816	162 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	BIK	Q13323	160 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	MRPL49	Q13405	166 aa	Known RBP	11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	BMPR2	Q13873	1038 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	UAP1	Q16222	522 aa	Predicted RBP	11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	EIF2S3L	Q2VIR3	472 aa	Known RBP	11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	LCA5	Q86VQ0	697 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	OR7G3	Q8NG95	312 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	EXT2	Q93063	718 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	ESAM	Q96AP7	390 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	TRIM44	Q96DX7	344 aa	Predicted RBP	11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	CMTM7	Q96FZ5	175 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	GPR78	Q96P69	363 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	PAFAH2	Q99487	392 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	UTP23	Q9BRU9	249 aa	Known RBP	11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	MS4A8	Q9BY19	250 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	TRIM45	Q9H8W5	580 aa	Predicted RBP	11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	PRDM7	Q9NQW5	492 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	RYDEN	Q9NUL5	291 aa	Known RBP	11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	OLAH	Q9NV23	265 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	MS4A12	Q9NXJ0	267 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	PLA2G3	Q9NZ20	509 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	PPT2	Q9UMR5	302 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	DAPP1	Q9UN19	280 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	ANGPTL3	Q9Y5C1	460 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	SPACA6	W5XKT8	324 aa		11.8	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	WIPF3	A6NGB9	483 aa		11.79	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708		H0YIV9	168 aa		11.79	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	CYR61	O00622	381 aa		11.79	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	CTNS	O60931	367 aa		11.79	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	RASAL1	O95294	804 aa		11.79	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	MLYCD	O95822	493 aa		11.79	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	MAOA	P21397	527 aa		11.79	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	BTG2	P78543	158 aa		11.79	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	PHEX	P78562	749 aa		11.79	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	TUBA3C	Q13748	450 aa		11.79	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	RUNX2	Q13950	521 aa		11.79	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	SERTAD2	Q14140	314 aa		11.79	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	PFKFB4	Q16877	469 aa		11.79	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	11.79	□□□□□ -0.52	6e-6	■□□□□ 8.6
CDK5RAP3-222	ENST00000581708	FBXO48	Q5FWF7	155 aa		11.79	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	DEPDC1	Q5TB30	811 aa		11.79	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	TUBA3E	Q6PEY2	450 aa		11.79	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	TRMT10C	Q7L0Y3	403 aa	Known RBP	11.79	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	RPS19BP1	Q86WX3	136 aa	Known RBP	11.79	□□□□□ -0.52
CDK5RAP3-222	ENST00000581708	CRLF3	Q8IUI8	442 aa		11.79	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms