RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 SPATA18Q8TC71 538 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 ATP8B4Q8TF62 1192 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 CHURC1Q8WUH1 139 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 ATP6V0A1Q93050 837 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 CFAP36Q96G28 342 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 LURAP1Q96LR2 239 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 DDX50Q9BQ39 737 aaKnown RBP3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 PAPOLGQ9BWT3 736 aaKnown RBP3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 LRRC2Q9BYS8 371 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 ZNF665Q9H7R5 613 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 MED20Q9H944 212 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 FAM212BQ9NTI7 297 aaPredicted RBP3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 MAD2L2Q9UI95 211 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 PILRAQ9UKJ1 303 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 EXOC6BQ9Y2D4 811 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 ABCC9O60706 1549 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 IGLV7-46A0A075B6I9 117 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 GTPBP10A4D1E9 387 aaKnown RBP3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 TCP10L2B9ZVM9 353 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 PSMD3O43242 534 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 GMNNO75496 209 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 OLFM2O95897 454 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 CHRNGP07510 517 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 NUDT17P0C025 328 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 B4GALT1P15291 398 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 TYMPP19971 482 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 ACKR3P25106 362 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 PDHA2P29803 388 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 ATP6V1E1P36543 226 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 CBX3Q13185 183 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 C3AR1Q16581 482 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 ALKBH5Q6P6C2 394 aaKnown RBP3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 KIF6Q6ZMV9 814 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 FRRS1Q6ZNA5 592 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 TOM1L2Q6ZVM7 507 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 DND1Q8IYX4 353 aaKnown RBP3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 ZNF444Q8N0Y2 327 aaPredicted RBP3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 ELMOD1Q8N336 334 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 GPR148Q8TDV2 347 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 HAS2Q92819 552 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 CCM2Q9BSQ5 444 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 DBNDD1Q9H9R9 158 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 ZCCHC3Q9NUD5 404 aaKnown RBP3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 COMMD8Q9NX08 183 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 NLGN3Q9NZ94 848 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 AKAP7Q9P0M2 348 aaPredicted RBP3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 SH3GLB1Q9Y371 365 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 KNSTRNQ9Y448 316 aa3.97□□□□□ -1.77
SMCHD1-205ENST00000581383 SLC15A5A6NIM6 579 aa3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 SRRM4A7MD48 611 aaKnown RBP3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 B4GAT1O43505 415 aa3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 VEGFDO43915 354 aa3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 MYOGP15173 224 aa3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 GPR183P32249 361 aa3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 BACE1P56817 501 aa3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 EVCP57679 992 aa3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 ARF5P84085 180 aa3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 GFPT1Q06210 699 aaPredicted RBP3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 NECTIN1Q15223 517 aa3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 MTHFSDQ2M296 383 aaKnown RBP3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 PLPP4Q5VZY2 271 aa3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 MYPOPQ86VE0 399 aaPredicted RBP3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 TRPV3Q8NET8 790 aa3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 OR9Q2Q8NGE9 314 aa3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 OR5M9Q8NGP3 310 aa3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 PRCCQ92733 491 aaPredicted RBP3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 ANKRD9Q96BM1 317 aaPredicted RBP3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 ATXN7L3BQ96GX2 97 aa3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 OVOL2Q9BRP0 275 aa3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 GFRA4Q9GZZ7 299 aa3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 FNDC4Q9H6D8 234 aaPredicted RBP3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 ZDHHC6Q9H6R6 413 aa3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 VIPAS39Q9H9C1 493 aa3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 GPN1Q9HCN4 374 aaPredicted RBP3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 MIS18AQ9NYP9 233 aa3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 ZNF319Q9P2F9 582 aa3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 THEGQ9P2T0 379 aa3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 KLK11Q9UBX7 282 aa3.96□□□□□ -1.78
SMCHD1-205ENST00000581383 MPTX1A8MV57 137 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 P2RX6O15547 441 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 ARHGEF9O43307 516 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 STBD1O95210 358 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 MT-ND3P03897 115 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 GSTA2P09210 222 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 FERP16591 822 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 UGT1A6P19224 532 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 OR1D2P34982 312 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 CLK1P49759 484 aaKnown RBP3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 HUNKP57058 714 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 IRX1P78414 480 aaPredicted RBP3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 GALK2Q01415 458 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 PDE7AQ13946 482 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 GIT2Q14161 759 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 SPHARQ15513 63 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 FASTKD1Q53R41 847 aaKnown RBP3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 SNRNP48Q6IEG0 339 aaKnown RBP3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 STXBP4Q6ZWJ1 553 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 ZNF410Q86VK4 478 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 NLRP14Q86W24 1093 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms