RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 CAPS2Q9BXY5 557 aa11.79□□□□□ -0.52
CBX1-206ENST00000581003 KCNK13Q9HB14 408 aa11.79□□□□□ -0.52
CBX1-206ENST00000581003 PRDM9Q9NQV7 894 aa11.79□□□□□ -0.52
CBX1-206ENST00000581003 RNF11Q9Y3C5 154 aa11.79□□□□□ -0.52
CBX1-206ENST00000581003 COPG1Q9Y678 874 aaKnown RBP11.79□□□□□ -0.52
CBX1-206ENST00000581003 URADA6NGE7 173 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 SYCE1LA8MT33 242 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 PSMD12O00232 456 aaPredicted RBP11.78□□□□□ -0.52
CBX1-206ENST00000581003 CYR61O00622 381 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 B3GALT2O43825 422 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 CBX6O95503 412 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 SHBGP04278 402 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 TUBB4AP04350 444 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 EPB42P16452 691 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 CASP2P42575 452 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 TSFMP43897 325 aaKnown RBP11.78□□□□□ -0.52
CBX1-206ENST00000581003 NEK2P51955 445 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 ALDH18A1P54886 795 aaKnown RBP11.78□□□□□ -0.52
CBX1-206ENST00000581003 RAB38P57729 211 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 ACTN3Q08043 901 aaPredicted RBP11.78□□□□□ -0.52
CBX1-206ENST00000581003 UBAP2LQ14157 1087 aaKnown RBP11.78□□□□□ -0.52
CBX1-206ENST00000581003 TLR1Q15399 786 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 ACER2Q5QJU3 275 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 TEX35Q5T0J7 233 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 GRHL2Q6ISB3 625 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 MED27Q6P2C8 311 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 TRIM40Q6P9F5 258 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 C16orf47Q6ZP98 133 aaPredicted RBP11.78□□□□□ -0.52
CBX1-206ENST00000581003 CEP128Q6ZU80 1094 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 SCUBE1Q8IWY4 988 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 IFT20Q8IY31 132 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 TMEM151AQ8N4L1 468 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 NFAM1Q8NET5 270 aaPredicted RBP11.78□□□□□ -0.52
CBX1-206ENST00000581003 TTLQ8NG68 377 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 HUS1BQ8NHY5 278 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 SCYL1Q96KG9 808 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 LMF1Q96S06 567 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 LPAR4Q99677 370 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 BARD1Q99728 777 aaKnown RBP11.78□□□□□ -0.52
CBX1-206ENST00000581003 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.78□□□□□ -0.52
CBX1-206ENST00000581003 ACTR8Q9H981 624 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 ZBTB26Q9HCK0 441 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 PRM3Q9NNZ6 103 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 MMP25Q9NPA2 562 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 DMRT3Q9NQL9 472 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 KCMF1Q9P0J7 381 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 ZNF223Q9UK11 482 aaPredicted RBP11.78□□□□□ -0.52
CBX1-206ENST00000581003 ANGPTL3Q9Y5C1 460 aa11.78□□□□□ -0.52
CBX1-206ENST00000581003 UTP20O75691 2785 aaKnown RBP11.78□□□□□ -0.52
CBX1-206ENST00000581003 SCN2AQ99250 2005 aa11.77□□□□□ -0.52
CBX1-206ENST00000581003 HECTD1Q9ULT8 2610 aa11.77□□□□□ -0.52
CBX1-206ENST00000581003 NBASA2RRP1 2371 aa11.77□□□□□ -0.52
CBX1-206ENST00000581003 ARHGAP10A1A4S6 786 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 SAGE2PA6NJ88 616 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 WASHC1A8K0Z3 465 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 GOLGA8RI6L899 631 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 PLPP1O14494 284 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 PCDH17O14917 1159 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 PRKNO60260 465 aaPredicted RBP11.77□□□□□ -0.53
CBX1-206ENST00000581003 KLHL41O60662 606 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 MYO1DO94832 1006 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 CYC1P08574 325 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 ABHD2P08910 425 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 IL10P22301 178 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 ATP5A1P25705 553 aaKnown RBP11.77□□□□□ -0.53
CBX1-206ENST00000581003 SERPINB9P50453 376 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 MTTPP55157 894 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 RPS13P62277 151 aaKnown RBP11.77□□□□□ -0.53
CBX1-206ENST00000581003 TUBA3CQ13748 450 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 GTF2H2Q13888 395 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 SLC29A2Q14542 456 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 PCBP2Q15366 365 aaKnown RBP eCLIP11.77□□□□□ -0.53
CBX1-206ENST00000581003 CPSF6Q16630 551 aaKnown RBP eCLIP11.77□□□□□ -0.53
CBX1-206ENST00000581003 PAGE2BQ5JRK9 111 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 ABHD17BQ5VST6 288 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 HIST2H2BCQ6DN03 193 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 H3F3CQ6NXT2 135 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 GTF2H2CQ6P1K8 395 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 KLC3Q6P597 504 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 TUBA3EQ6PEY2 450 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 ZNF321PQ8N8H1 164 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 ACOT4Q8N9L9 421 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 PRR7Q8TB68 274 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 M1APQ8TC57 530 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 ELP5Q8TE02 316 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 DOK4Q8TEW6 326 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 THAP3Q8WTV1 239 aaPredicted RBP11.77□□□□□ -0.53
CBX1-206ENST00000581003 UCN3Q969E3 161 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 MTFMTQ96DP5 389 aaKnown RBP11.77□□□□□ -0.53
CBX1-206ENST00000581003 SERINC2Q96SA4 455 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 ZNF717Q9BY31 904 aaPredicted RBP11.77□□□□□ -0.53
CBX1-206ENST00000581003 TSPYL1Q9H0U9 437 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 NOL11Q9H8H0 719 aaKnown RBP11.77□□□□□ -0.53
CBX1-206ENST00000581003 IPPKQ9H8X2 491 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 COPS7BQ9H9Q2 264 aaPredicted RBP11.77□□□□□ -0.53
CBX1-206ENST00000581003 LIN28AQ9H9Z2 209 aaKnown RBP11.77□□□□□ -0.53
CBX1-206ENST00000581003 PRTFDC1Q9NRG1 225 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 PNO1Q9NRX1 252 aaKnown RBP11.77□□□□□ -0.53
CBX1-206ENST00000581003 STMN3Q9NZ72 180 aa11.77□□□□□ -0.53
CBX1-206ENST00000581003 ZNF180Q9UJW8 692 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms