RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 PMEPA1Q969W9 287 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 MTFMTQ96DP5 389 aaKnown RBP9.85□□□□□ -0.83
CCDC47-203ENST00000580986 CLIP3Q96DZ5 547 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 ZNF764Q96H86 408 aaPredicted RBP9.85□□□□□ -0.83
CCDC47-203ENST00000580986 C3orf30Q96M34 536 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 HBEGFQ99075 208 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 MACROD1Q9BQ69 325 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 MRPL1Q9BYD6 325 aaKnown RBP9.85□□□□□ -0.83
CCDC47-203ENST00000580986 TRIM55Q9BYV6 548 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 NUF2Q9BZD4 464 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 WDR54Q9H977 334 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 LRTM1Q9HBL6 345 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 ZNF304Q9HCX3 659 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 MKKSQ9NPJ1 570 aaPredicted RBP9.85□□□□□ -0.83
CCDC47-203ENST00000580986 STARD5Q9NSY2 213 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 MRGBPQ9NV56 204 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 LYARQ9NX58 379 aaKnown RBP9.85□□□□□ -0.83
CCDC47-203ENST00000580986 FOXJ2Q9P0K8 574 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 DHCR7Q9UBM7 475 aaKnown RBP9.85□□□□□ -0.83
CCDC47-203ENST00000580986 PHF11Q9UIL8 331 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 NXT1Q9UKK6 140 aaKnown RBP9.85□□□□□ -0.83
CCDC47-203ENST00000580986 MRPS2Q9Y399 296 aaKnown RBP9.85□□□□□ -0.83
CCDC47-203ENST00000580986 FIS1Q9Y3D6 152 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 NAALAD2Q9Y3Q0 740 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 FER1L5A0AVI2 2057 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 SDK2Q58EX2 2172 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 C21orf140B9A014 251 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 SDHDO14521 159 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 PCDH17O14917 1159 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 BRINP1O60477 761 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 NTRK1P04629 796 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 VIMP08670 466 aaKnown RBP9.84□□□□□ -0.83
CCDC47-203ENST00000580986 RAB40ALP0C0E4 278 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 LIPCP11150 499 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 SPTBP11277 2137 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 ZNF28P17035 718 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 IL1RNP18510 177 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 ITGAXP20702 1163 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 MAPK1P28482 360 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 TPP2P29144 1249 aaPredicted RBP9.84□□□□□ -0.83
CCDC47-203ENST00000580986 TIA1P31483 386 aaKnown RBP eCLIP9.84□□□□□ -0.83
CCDC47-203ENST00000580986 RAB8AP61006 207 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 ERVK-8P63133 956 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 BTN3A2P78410 334 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 EMX2Q04743 252 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 SLC9A5Q14940 896 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 C6orf136Q5SQH8 315 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 PRAMEF17Q5VTA0 474 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 FOXR1Q6PIV2 292 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 EPGNQ6UW88 154 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 C6orf15Q6UXA7 325 aaPredicted RBP9.84□□□□□ -0.83
CCDC47-203ENST00000580986 ZNF793Q6ZN11 406 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 LIAT1Q6ZQX7 453 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 IKBIPQ70UQ0 350 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 OVCH1Q7RTY7 1134 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 MAVSQ7Z434 540 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 NLGN4XQ8N0W4 816 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 C1orf52Q8N6N3 182 aaKnown RBP9.84□□□□□ -0.83
CCDC47-203ENST00000580986 NLGN4YQ8NFZ3 816 aaPredicted RBP9.84□□□□□ -0.83
CCDC47-203ENST00000580986 OR9A4Q8NGU2 314 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 CEP70Q8NHQ1 597 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 SNIP1Q8TAD8 396 aaKnown RBP9.84□□□□□ -0.83
CCDC47-203ENST00000580986 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.84□□□□□ -0.83
CCDC47-203ENST00000580986 ZCCHC10Q8TBK6 192 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 NACC2Q96BF6 587 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 TUBGCP3Q96CW5 907 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 APIPQ96GX9 242 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 CCDC28BQ9BUN5 200 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 NSRP1Q9H0G5 558 aaKnown RBP9.84□□□□□ -0.83
CCDC47-203ENST00000580986 FGFR1OP2Q9NVK5 253 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 C14orf105Q9NVL8 296 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 MARCOQ9UEW3 520 aaPredicted RBP9.84□□□□□ -0.83
CCDC47-203ENST00000580986 ADAM21Q9UKJ8 722 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 ANGPTL2Q9UKU9 493 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 PADI1Q9ULC6 663 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 DAPP1Q9UN19 280 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 MAPRE3Q9UPY8 281 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 PCDHGA6Q9Y5G7 932 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 SPACA6W5XKT8 324 aa9.84□□□□□ -0.83
CCDC47-203ENST00000580986 NUP210LQ5VU65 1888 aa9.83□□□□□ -0.84
CCDC47-203ENST00000580986 FREM2Q5SZK8 3169 aa9.83□□□□□ -0.84
CCDC47-203ENST00000580986 A0A0A6YYC8 382 aaPredicted RBP9.83□□□□□ -0.84
CCDC47-203ENST00000580986 ARHGAP10A1A4S6 786 aa9.83□□□□□ -0.84
CCDC47-203ENST00000580986 GMNCA6NCL1 334 aa9.83□□□□□ -0.84
CCDC47-203ENST00000580986 VSTM2BA6NLU5 285 aa9.83□□□□□ -0.84
CCDC47-203ENST00000580986 C9J4A7 227 aa9.83□□□□□ -0.84
CCDC47-203ENST00000580986 I3L1I5 382 aaPredicted RBP9.83□□□□□ -0.84
CCDC47-203ENST00000580986 PCDH7O60245 1069 aa9.83□□□□□ -0.84
CCDC47-203ENST00000580986 SEC22BO75396 215 aa9.83□□□□□ -0.84
CCDC47-203ENST00000580986 MYO1DO94832 1006 aa9.83□□□□□ -0.84
CCDC47-203ENST00000580986 RECKO95980 971 aa9.83□□□□□ -0.84
CCDC47-203ENST00000580986 CCNYL3P0C7X3 344 aa9.83□□□□□ -0.84
CCDC47-203ENST00000580986 KITP10721 976 aa9.83□□□□□ -0.84
CCDC47-203ENST00000580986 PRPS2P11908 318 aa9.83□□□□□ -0.84
CCDC47-203ENST00000580986 RNH1P13489 461 aaKnown RBP9.83□□□□□ -0.84
CCDC47-203ENST00000580986 LBPP18428 481 aa9.83□□□□□ -0.84
CCDC47-203ENST00000580986 FBLP22087 321 aaKnown RBP9.83□□□□□ -0.84
CCDC47-203ENST00000580986 ALAS2P22557 587 aa9.83□□□□□ -0.84
CCDC47-203ENST00000580986 JAK1P23458 1154 aa9.83□□□□□ -0.84
CCDC47-203ENST00000580986 BUD31P41223 144 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms