RNA–Protein interactions for RNA: ENST00000580898.5

PGAP3-207, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-207ENST00000580898 SPACA6W5XKT8 324 aa12.69□□□□□ -0.38
PGAP3-207ENST00000580898 CNTRLQ7Z7A1 2325 aa12.69□□□□□ -0.38
PGAP3-207ENST00000580898 SCN2AQ99250 2005 aa12.69□□□□□ -0.38
PGAP3-207ENST00000580898 ZGRF1Q86YA3 2104 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 SCN3AQ9NY46 2000 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 E9PLN8 166 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 EIF3HO15372 352 aaKnown RBP eCLIP12.68□□□□□ -0.38
PGAP3-207ENST00000580898 ITGA10O75578 1167 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 ZFAND5O76080 213 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 PRF1P14222 555 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 STMN1P16949 149 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 HNRNPH1P31943 449 aaKnown RBP12.68□□□□□ -0.38
PGAP3-207ENST00000580898 GGT5P36269 586 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 GDF5P43026 501 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 SSR4P51571 173 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 PLA2G16P53816 162 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 MTTPP55157 894 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 FASTKD3Q14CZ7 662 aaKnown RBP12.68□□□□□ -0.38
PGAP3-207ENST00000580898 ELAVL1Q15717 326 aaKnown RBP12.68□□□□□ -0.38
PGAP3-207ENST00000580898 ZNF468Q5VIY5 522 aaPredicted RBP12.68□□□□□ -0.38
PGAP3-207ENST00000580898 PAOXQ6QHF9 649 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 CAPN12Q6ZSI9 719 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 MAATS1Q7Z4T9 603 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 CEP97Q8IW35 865 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 SCUBE1Q8IWY4 988 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 SNX31Q8N9S9 440 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 APCDD1LQ8NCL9 501 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 AGAP11Q8TF27 550 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 ANKRD49Q8WVL7 239 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 DAZLQ92904 295 aaKnown RBP12.68□□□□□ -0.38
PGAP3-207ENST00000580898 KIAA1191Q96A73 305 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 PTCD3Q96EY7 689 aaKnown RBP12.68□□□□□ -0.38
PGAP3-207ENST00000580898 KRT12Q99456 494 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 CPNE1Q99829 537 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 VKORC1Q9BQB6 163 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 EFCAB11Q9BUY7 163 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 CD274Q9NZQ7 290 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 PPIEQ9UNP9 301 aaKnown RBP12.68□□□□□ -0.38
PGAP3-207ENST00000580898 ERVK-11Q9UQG0 969 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 YARS2Q9Y2Z4 477 aaKnown RBP12.68□□□□□ -0.38
PGAP3-207ENST00000580898 CLCA3PQ9Y6N3 262 aa12.68□□□□□ -0.38
PGAP3-207ENST00000580898 A0A0G2JN53 185 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 FAM187AA6NFU0 413 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 A8MVJ9 347 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 C4orf51C9J302 202 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 ACOT7O00154 380 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 PEX1O43933 1283 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 STK16O75716 305 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 TUBB4AP04350 444 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 IFNA16P05015 189 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 GSTA2P09210 222 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 CCDC166P0CW27 439 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 PTGS2P35354 604 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 RPL21P46778 160 aaKnown RBP12.67□□□□□ -0.38
PGAP3-207ENST00000580898 KCNC1P48547 511 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 STX4Q12846 297 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 CBLBQ13191 982 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 BMPR2Q13873 1038 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 PDK4Q16654 411 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 XKR6Q5GH73 641 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 TMEM211Q6ICI0 200 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 SULF2Q8IWU5 870 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 FAM47BQ8NA70 645 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 C16orf52Q8NHV5 167 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 CA5BP1Q8WTZ4 195 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 UBE2E3Q969T4 207 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 NCLNQ969V3 563 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 KCNC2Q96PR1 638 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 PHF12Q96QT6 1004 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 KCNF1Q9H3M0 494 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 HPF1Q9NWY4 346 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 RNF112Q9ULX5 631 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 PPT2Q9UMR5 302 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 SNX24Q9Y343 169 aa12.67□□□□□ -0.38
PGAP3-207ENST00000580898 CACNA1DQ01668 2161 aa12.66□□□□□ -0.38
PGAP3-207ENST00000580898 CTAGE15A4D2H0 777 aa12.66□□□□□ -0.38
PGAP3-207ENST00000580898 USP27XA6NNY8 438 aa12.66□□□□□ -0.38
PGAP3-207ENST00000580898 CDC40O60508 579 aaKnown RBP eCLIP12.66□□□□□ -0.38
PGAP3-207ENST00000580898 TPOP07202 933 aa12.66□□□□□ -0.38
PGAP3-207ENST00000580898 SNRPB2P08579 225 aaKnown RBP12.66□□□□□ -0.38
PGAP3-207ENST00000580898 SERPINB1P30740 379 aa12.66□□□□□ -0.38
PGAP3-207ENST00000580898 SSTR2P30874 369 aa12.66□□□□□ -0.38
PGAP3-207ENST00000580898 SPRP35270 261 aaPredicted RBP12.66□□□□□ -0.38
PGAP3-207ENST00000580898 GP5P40197 560 aa12.66□□□□□ -0.38
PGAP3-207ENST00000580898 HSPA7P48741 367 aa12.66□□□□□ -0.38
PGAP3-207ENST00000580898 HSF1Q00613 529 aa12.66□□□□□ -0.38
PGAP3-207ENST00000580898 IRF8Q02556 426 aa12.66□□□□□ -0.38
PGAP3-207ENST00000580898 RUNX2Q13950 521 aa12.66□□□□□ -0.38
PGAP3-207ENST00000580898 SERTAD2Q14140 314 aa12.66□□□□□ -0.38
PGAP3-207ENST00000580898 C18orf21Q32NC0 220 aaPredicted RBP12.66□□□□□ -0.38
PGAP3-207ENST00000580898 ADPRMQ3LIE5 342 aa12.66□□□□□ -0.38
PGAP3-207ENST00000580898 ABHD17CQ6PCB6 329 aa12.66□□□□□ -0.38
PGAP3-207ENST00000580898 HSDL2Q6YN16 418 aa12.66□□□□□ -0.38
PGAP3-207ENST00000580898 CYS1Q717R9 158 aa12.66□□□□□ -0.38
PGAP3-207ENST00000580898 LRRC70Q7Z2Q7 622 aa12.66□□□□□ -0.38
PGAP3-207ENST00000580898 CTAGE6Q86UF2 777 aa12.66□□□□□ -0.38
PGAP3-207ENST00000580898 DOLPP1Q86YN1 238 aa12.66□□□□□ -0.38
PGAP3-207ENST00000580898 MORN4Q8NDC4 146 aa12.66□□□□□ -0.38
PGAP3-207ENST00000580898 OR14A16Q8NHC5 309 aa12.66□□□□□ -0.38
PGAP3-207ENST00000580898 FAM57AQ8TBR7 257 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms