RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 SLC22A2O15244 555 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 ERI3O43414 337 aaKnown RBP14.7□□□□□ -0.06
SS18-216ENST00000580751 GALR3O60755 368 aaPredicted RBP14.7□□□□□ -0.06
SS18-216ENST00000580751 KLHL18O94889 574 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 TBX6O95947 436 aaPredicted RBP14.7□□□□□ -0.06
SS18-216ENST00000580751 ALBP02768 609 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 RAB40ALP0C0E4 278 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 PRR35P0CG20 571 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 ACPPP15309 386 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 ITGAXP20702 1163 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 PTX3P26022 381 aaPredicted RBP14.7□□□□□ -0.06
SS18-216ENST00000580751 OR1D4P47884 311 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 RAB8AP61006 207 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 MAD2L1Q13257 205 aaPredicted RBP14.7□□□□□ -0.06
SS18-216ENST00000580751 DNASE1L3Q13609 305 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 DEFB134Q4QY38 66 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 BROXQ5VW32 411 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 KHDRBS2Q5VWX1 349 aaKnown RBP14.7□□□□□ -0.06
SS18-216ENST00000580751 FAM91A1Q658Y4 838 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 FAM199XQ6PEV8 388 aaPredicted RBP14.7□□□□□ -0.06
SS18-216ENST00000580751 LARP4Q71RC2 724 aaKnown RBP eCLIP14.7□□□□□ -0.06
SS18-216ENST00000580751 SPATA19Q7Z5L4 167 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 SPACA3Q8IXA5 215 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 DDIASQ8IXT1 998 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 OR9A4Q8NGU2 314 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 SELENOMQ8WWX9 145 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 KCNC2Q96PR1 638 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 LRRC37BQ96QE4 947 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 KCNA7Q96RP8 456 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 CCNL2Q96S94 520 aaPredicted RBP14.7□□□□□ -0.06
SS18-216ENST00000580751 ROGDIQ9GZN7 287 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 TUBB1Q9H4B7 451 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 KLHL31Q9H511 634 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 AKIRIN1Q9H9L7 192 aaPredicted RBP14.7□□□□□ -0.06
SS18-216ENST00000580751 CLK4Q9HAZ1 481 aaKnown RBP14.7□□□□□ -0.06
SS18-216ENST00000580751 NXT1Q9UKK6 140 aaKnown RBP14.7□□□□□ -0.06
SS18-216ENST00000580751 NAALAD2Q9Y3Q0 740 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 PCDHGA6Q9Y5G7 932 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 MAU2Q9Y6X3 613 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 PKD1L2Q7Z442 2459 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 MAGEB17A8MXT2 336 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 TAF4O00268 1085 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 EBAG9O00559 213 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 TERTO14746 1132 aaKnown RBP14.69□□□□□ -0.06
SS18-216ENST00000580751 SKAP2O75563 359 aaPredicted RBP14.69□□□□□ -0.06
SS18-216ENST00000580751 RSL1D1O76021 490 aaKnown RBP14.69□□□□□ -0.06
SS18-216ENST00000580751 TGFB1P01137 390 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 SMIM10L1P0DMW3 83 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 LIFP15018 202 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 LBPP18428 481 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 SERPINB3P29508 390 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 MRPL19P49406 292 aaKnown RBP14.69□□□□□ -0.06
SS18-216ENST00000580751 NEK2P51955 445 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 RAP1GDS1P52306 607 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 ARFIP1P53367 373 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 UCNP55089 124 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 RPS13P62277 151 aaKnown RBP14.69□□□□□ -0.06
SS18-216ENST00000580751 CUL3Q13618 768 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 COL9A2Q14055 689 aaPredicted RBP14.69□□□□□ -0.06
SS18-216ENST00000580751 SLC9A5Q14940 896 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 SLC9B1Q4ZJI4 515 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 DEPDC1Q5TB30 811 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 MLIPQ5VWP3 458 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 LCN10Q6JVE6 187 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 COX15Q7KZN9 410 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 OVCH1Q7RTY7 1134 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 PRSS41Q7RTY9 318 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 VASH2Q86V25 355 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 PDSS2Q86YH6 399 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 FAM9CQ8IZT9 166 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 DTWD1Q8N5C7 304 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 ENDOVQ8N8Q3 282 aaKnown RBP14.69□□□□□ -0.06
SS18-216ENST00000580751 AMER3Q8N944 861 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.69□□□□□ -0.06
SS18-216ENST00000580751 THOC1Q96FV9 657 aaKnown RBP14.69□□□□□ -0.06
SS18-216ENST00000580751 SMIM10Q96HG1 83 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 F2RL3Q96RI0 385 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 SERPINI1Q99574 410 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 EBF4Q9BQW3 602 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 AICDAQ9GZX7 198 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 SLC26A1Q9H2B4 701 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 WDR54Q9H977 334 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 COPS7BQ9H9Q2 264 aaPredicted RBP14.69□□□□□ -0.06
SS18-216ENST00000580751 SLC22A11Q9NSA0 550 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 HEY2Q9UBP5 337 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 ZNF282Q9UDV7 671 aaPredicted RBP14.69□□□□□ -0.06
SS18-216ENST00000580751 SSUH2Q9Y2M2 353 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 TMED5Q9Y3A6 229 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 FIS1Q9Y3D6 152 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 MAP4K5Q9Y4K4 846 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 CCL27Q9Y4X3 112 aa14.69□□□□□ -0.06
SS18-216ENST00000580751 SGK494L7N484 410 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 RDH16O75452 317 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 SEMA3DO95025 777 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 JUNP05412 331 aaKnown RBP14.68□□□□□ -0.06
SS18-216ENST00000580751 PTPN4P29074 926 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 EPHA3P29320 983 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 TSFMP43897 325 aaKnown RBP14.68□□□□□ -0.06
SS18-216ENST00000580751 ATP4BP51164 291 aa14.68□□□□□ -0.06
SS18-216ENST00000580751 PLA2G16P53816 162 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms