RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 REXO4Q9GZR2 422 aaKnown RBP9.36□□□□□ -0.91
GGA3-209ENST00000580646 ING2Q9H160 280 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 EML4Q9HC35 981 aaKnown RBP9.36□□□□□ -0.91
GGA3-209ENST00000580646 ANKHQ9HCJ1 492 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 KCNK9Q9NPC2 374 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 DMRT3Q9NQL9 472 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 ACSS2Q9NR19 701 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 NKIRAS1Q9NYS0 192 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 NDOR1Q9UHB4 597 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 GPN3Q9UHW5 284 aaPredicted RBP9.36□□□□□ -0.91
GGA3-209ENST00000580646 NXT1Q9UKK6 140 aaKnown RBP9.36□□□□□ -0.91
GGA3-209ENST00000580646 PADI2Q9Y2J8 665 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 MAP4K5Q9Y4K4 846 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 SCN2AQ99250 2005 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 A0A1B0GTL3 188 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 VSTM2BA6NLU5 285 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 TMEM114B3SHH9 223 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 UBFD1O14562 309 aaKnown RBP9.35□□□□□ -0.91
GGA3-209ENST00000580646 KLF7O75840 302 aaPredicted RBP9.35□□□□□ -0.91
GGA3-209ENST00000580646 OR4F21O95013 312 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 SERPIND1P05546 499 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 FGF4P08620 206 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 ZNF888P0CJ79 500 aaPredicted RBP9.35□□□□□ -0.91
GGA3-209ENST00000580646 ATXN8OSP0DMR3 200 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 PCNAP12004 261 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 FBLP22087 321 aaKnown RBP9.35□□□□□ -0.91
GGA3-209ENST00000580646 HNRNPH1P31943 449 aaKnown RBP9.35□□□□□ -0.91
GGA3-209ENST00000580646 ARL1P40616 181 aaPredicted RBP9.35□□□□□ -0.91
GGA3-209ENST00000580646 CASRP41180 1078 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 CORO7P57737 925 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 TLE1Q04724 770 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 KLRB1Q12918 225 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 CSTF3Q12996 717 aaKnown RBP9.35□□□□□ -0.91
GGA3-209ENST00000580646 SSPNQ14714 243 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 TOR1AIP1Q5JTV8 583 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 HHATQ5VTY9 493 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 KHDRBS2Q5VWX1 349 aaKnown RBP9.35□□□□□ -0.91
GGA3-209ENST00000580646 TTC19Q6DKK2 380 aaPredicted RBP9.35□□□□□ -0.91
GGA3-209ENST00000580646 ABHD17CQ6PCB6 329 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 COX15Q7KZN9 410 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 PDSS2Q86YH6 399 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 AMER3Q8N944 861 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 TEX19Q8NA77 164 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 METTL6Q8TCB7 284 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 ADAMTS18Q8TE60 1221 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 MMABQ96EY8 250 aaPredicted RBP9.35□□□□□ -0.91
GGA3-209ENST00000580646 KCNC2Q96PR1 638 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 SERPINI1Q99574 410 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 CENPKQ9BS16 269 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 TBCDQ9BTW9 1192 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 SLC25A23Q9BV35 468 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 MECRQ9BV79 373 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 AICDAQ9GZX7 198 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 EPN3Q9H201 632 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 ELOVL6Q9H5J4 265 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 MID1IP1Q9NPA3 183 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 MKKSQ9NPJ1 570 aaPredicted RBP9.35□□□□□ -0.91
GGA3-209ENST00000580646 SLC22A11Q9NSA0 550 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 C14orf105Q9NVL8 296 aa9.35□□□□□ -0.91
GGA3-209ENST00000580646 IFT80Q9P2H3 777 aaPredicted RBP9.35□□□□□ -0.91
GGA3-209ENST00000580646 ZNF282Q9UDV7 671 aaPredicted RBP9.35□□□□□ -0.91
GGA3-209ENST00000580646 MRPS2Q9Y399 296 aaKnown RBP9.35□□□□□ -0.91
GGA3-209ENST00000580646 A0A0A6YYC8 382 aaPredicted RBP9.34□□□□□ -0.91
GGA3-209ENST00000580646 MAGEB17A8MXT2 336 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 NPIPB8E9PQR5 432 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 I3L1I5 382 aaPredicted RBP9.34□□□□□ -0.91
GGA3-209ENST00000580646 PCDH17O14917 1159 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 ERI3O43414 337 aaKnown RBP9.34□□□□□ -0.91
GGA3-209ENST00000580646 CNOT3O75175 753 aaKnown RBP9.34□□□□□ -0.91
GGA3-209ENST00000580646 ULK1O75385 1050 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 KLHL18O94889 574 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 PDGFAP04085 211 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 SERPINE1P05121 402 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 UROSP10746 265 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 IL1RNP18510 177 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 TSPAN8P19075 237 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 HMOX2P30519 316 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 OTX2P32243 289 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 OR1D4P47884 311 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 WDR4P57081 412 aaKnown RBP9.34□□□□□ -0.91
GGA3-209ENST00000580646 SLC9A5Q14940 896 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 NKG7Q16617 165 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 COLEC12Q5KU26 742 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 ADNP2Q6IQ32 1131 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 CUZD1Q86UP6 607 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 RAB43Q86YS6 212 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 TRIM42Q8IWZ5 723 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 CDYL2Q8N8U2 506 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 GBP7Q8N8V2 638 aaPredicted RBP9.34□□□□□ -0.91
GGA3-209ENST00000580646 TMEM102Q8N9M5 508 aaPredicted RBP9.34□□□□□ -0.91
GGA3-209ENST00000580646 OR9A4Q8NGU2 314 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 OR2Y1Q8NGV0 311 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 ZCCHC10Q8TBK6 192 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 SELENOMQ8WWX9 145 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 CCT6BQ92526 530 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 RGMAQ96B86 450 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 METTL2AQ96IZ6 378 aaKnown RBP9.34□□□□□ -0.91
GGA3-209ENST00000580646 FAR2Q96K12 515 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 QRFPRQ96P65 431 aa9.34□□□□□ -0.91
GGA3-209ENST00000580646 IP6K3Q96PC2 410 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms