RNA–Protein interactions for RNA: ENST00000579838.1

NUP85-213, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 373 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-213ENST00000579838 TBC1D3DA0A087WVF3 549 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 TBC1D3IA0A087WXS9 549 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 TBC1D3EA0A087X179 549 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 TBC1D3KA0A087X1G2 549 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 SMIM31A0A1B0GVY4 71 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 A0A1W2PRB8 838 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 TCRBV21S2A2A0A5A6 115 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 TRBC2A0A5B9 178 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 A6NCN8 305 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 TBC1D3FA6NER0 549 aaPredicted RBP4.4□□□□□ -1.71
NUP85-213ENST00000579838 ANKDD1BA6NHY2 528 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 PDZK1P1A8MUH7 402 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 EVPLLA8MZ36 301 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 TBC1D3LB9A6J9 549 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 H0YAE9 185 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 H3BQ06 376 aaPredicted RBP4.4□□□□□ -1.71
NUP85-213ENST00000579838 P2RX6O15547 441 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 AHCYL1O43865 530 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 TBX19O60806 448 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 PRAMEF10O60809 474 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 NME6O75414 186 aaPredicted RBP4.4□□□□□ -1.71
NUP85-213ENST00000579838 SEMA3DO95025 777 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 ALBP02768 609 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 FABP3P05413 133 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 SERPIND1P05546 499 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 FESP07332 822 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 TBC1D3HP0C7X1 549 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 ALPPL2P10696 532 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 ITGAMP11215 1152 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 CYP4B1P13584 511 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 CD247P20963 164 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 PTX3P26022 381 aaPredicted RBP4.4□□□□□ -1.71
NUP85-213ENST00000579838 EPHA2P29317 976 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 CRATP43155 626 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 OR1E2P47887 323 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 LSSP48449 732 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 ALDH9A1P49189 494 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 TPMTP51580 245 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 CCR8P51685 355 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 NR1H2P55055 460 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 PCBP3P57721 371 aaKnown RBP4.4□□□□□ -1.71
NUP85-213ENST00000579838 PCBP4P57723 403 aaKnown RBP4.4□□□□□ -1.71
NUP85-213ENST00000579838 KIAA1024LP59773 190 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 CD47Q08722 323 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 FUT5Q11128 374 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 SGCGQ13326 291 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 PMS2P3Q13401 168 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 RAPSNQ13702 412 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 SCARB2Q14108 478 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 VEZF1Q14119 521 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 NFATC4Q14934 902 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 COL19A1Q14993 1142 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 ARHGAP19Q14CB8 494 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 HIST2H2ACQ16777 129 aaPredicted RBP4.4□□□□□ -1.71
NUP85-213ENST00000579838 SLC5A12Q1EHB4 618 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 ALG11Q2TAA5 492 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 PRRT3Q5FWE3 981 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 CCNYL2Q5T2Q4 361 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 GCNT6Q5T4J0 391 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 ZNF691Q5VV52 312 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 SAXO2Q658L1 398 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 TBC1D3GQ6DHY5 549 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 HIST2H2AA3Q6FI13 130 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 OR2T5Q6IEZ7 315 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 MRM1Q6IN84 353 aaKnown RBP4.4□□□□□ -1.71
NUP85-213ENST00000579838 TBC1D3CQ6IPX1 549 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 ZNF425Q6IV72 752 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 KRT80Q6KB66 452 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 ERICH5Q6P6B1 374 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 SHQ1Q6PI26 577 aaKnown RBP4.4□□□□□ -1.71
NUP85-213ENST00000579838 TTC33Q6PID6 262 aaPredicted RBP4.4□□□□□ -1.71
NUP85-213ENST00000579838 ENPP7Q6UWV6 458 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 TMEM26Q6ZUK4 368 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 MTSS1LQ765P7 747 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 CCDC80Q76M96 950 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 RD3Q7Z3Z2 195 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 VN1R4Q7Z5H5 301 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 HMGN2P46Q86SG4 172 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 LACC1Q8IV20 430 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 ZC3H7AQ8IWR0 971 aaKnown RBP4.4□□□□□ -1.71
NUP85-213ENST00000579838 TBC1D3Q8IZP1 549 aaPredicted RBP4.4□□□□□ -1.71
NUP85-213ENST00000579838 EID3Q8N140 333 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 SLC22A18ASQ8N1D0 253 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 KRT78Q8N1N4 520 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 SVOPLQ8N434 492 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 SMRP1Q8NCR6 262 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 FLCNQ8NFG4 579 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 OR2L3Q8NG85 312 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 GPR32P1Q8NGA4 272 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 OR2T29Q8NH02 315 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 OR8K5Q8NH50 307 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 RPLP0P6Q8NHW5 317 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 CNIH3Q8TBE1 160 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 FBLIM1Q8WUP2 373 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 APOBEC4Q8WW27 367 aaKnown RBP4.4□□□□□ -1.71
NUP85-213ENST00000579838 PATE1Q8WXA2 126 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 STARD8Q92502 1023 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 SNX19Q92543 992 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 RAB8BQ92930 207 aa4.4□□□□□ -1.71
NUP85-213ENST00000579838 EXOSC8Q96B26 276 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms