RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 VPS39Q96JC1 886 aa13.24□□□□□ -0.29
SMARCD2-205ENST00000577686 PLSCR2Q9NRY7 297 aa13.24□□□□□ -0.29
SMARCD2-205ENST00000577686 KCMF1Q9P0J7 381 aa13.24□□□□□ -0.29
SMARCD2-205ENST00000577686 CLCA3PQ9Y6N3 262 aa13.24□□□□□ -0.29
SMARCD2-205ENST00000577686 SPACA6W5XKT8 324 aa13.24□□□□□ -0.29
SMARCD2-205ENST00000577686 ANKDD1BA6NHY2 528 aa13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 DNALI1O14645 258 aaPredicted RBP13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 ERI3O43414 337 aaKnown RBP13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 B3GALT4O96024 378 aa13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 IFNA16P05015 189 aa13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 SMIM10L1P0DMW3 83 aa13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 IGFBP2P18065 325 aa13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 ART1P52961 327 aa13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 CCZ1BP86790 482 aa13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 CCZ1P86791 482 aaPredicted RBP13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 TIAL1Q01085 375 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 HYAL2Q12891 473 aa13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 EFTUD2Q15029 972 aaKnown RBP eCLIP13.23□□□□□ -0.297e-7■■■■□ 20.3
SMARCD2-205ENST00000577686 RNASEH2BQ5TBB1 312 aaKnown RBP13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 TMIGD1Q6UXZ0 262 aa13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 HSDL2Q6YN16 418 aa13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 RTL4Q6ZR62 310 aa13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 SCUBE1Q8IWY4 988 aa13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 DMRTC2Q8IXT2 367 aaPredicted RBP13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 ANKRD53Q8N9V6 530 aa13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 CHDHQ8NE62 594 aaPredicted RBP13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 OR5L2Q8NGL0 311 aa13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 OR14A16Q8NHC5 309 aa13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 KIAA1191Q96A73 305 aa13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 LRRC46Q96FV0 321 aa13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 SMIM10Q96HG1 83 aa13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 SMC6Q96SB8 1091 aa13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 ROGDIQ9GZN7 287 aa13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 SLC22A14Q9Y267 594 aa13.23□□□□□ -0.29
SMARCD2-205ENST00000577686 CSMD1Q96PZ7 3565 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 NKX2-6A6NCS4 301 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 ZNHIT1O43257 154 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 DYRK3O43781 588 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 PDE9AO76083 593 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 WDR47O94967 919 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 HOXD4P09016 255 aaPredicted RBP13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 C1GALT1C1LP0DN25 315 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 ACVR2AP27037 513 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 FOLH1Q04609 750 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 PMPCAQ10713 525 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 TBL3Q12788 808 aaKnown RBP13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 STX4Q12846 297 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 SERTAD2Q14140 314 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 KRTAP21-3Q3LHN1 58 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 OPN5Q6U736 354 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 B3GNT6Q6ZMB0 384 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 KLHDC8AQ8IYD2 350 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 AGGF1Q8N302 714 aaeCLIP13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 TCAIMQ8N3R3 496 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 FAM109AQ8N4B1 249 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 MORN4Q8NDC4 146 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 SRFBP1Q8NEF9 429 aaKnown RBP13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 OR10Q1Q8NGQ4 319 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 LRRC39Q96DD0 335 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 SGCZQ96LD1 299 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 SERINC2Q96SA4 455 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 FAM173AQ9BQD7 235 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 DEFB127Q9H1M4 99 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 SPNS1Q9H2V7 528 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 CNOT10Q9H9A5 744 aaKnown RBP13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 RYDENQ9NUL5 291 aaKnown RBP13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 NSMCE4AQ9NXX6 385 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 GPRC5BQ9NZH0 403 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 TNFRSF10DQ9UBN6 386 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 CTNNAL1Q9UBT7 734 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 COPS7AQ9UBW8 275 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 OARD1Q9Y530 152 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 CCDC168Q8NDH2 2452 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 POLQO75417 2590 aa13.22□□□□□ -0.29
SMARCD2-205ENST00000577686 NPIPA2E9PIF3 369 aa13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 NPIPA3F8WFD2 350 aa13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 CLGNO14967 610 aa13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 WDR1O75083 606 aa13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 DNAJB6O75190 326 aa13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 CLEC3AO75596 197 aa13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 OR2J2O76002 312 aa13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 TOXO94900 526 aa13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 P04436 131 aa13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 COX7A2P14406 83 aa13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 ZNF37AP17032 561 aaPredicted RBP13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 TNNI3P19429 210 aa13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 GABRB3P28472 473 aa13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 SLC12A2P55011 1212 aa13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 MTTPP55157 894 aa13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 SLBPQ14493 270 aaKnown RBP eCLIP13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 PPP1R3AQ16821 1122 aa13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 TEDDM1Q5T9Z0 273 aa13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 SBSNQ6UWP8 590 aa13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 IL20RBQ6UXL0 311 aa13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 MDGA2Q7Z553 956 aa13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 MARVELD2Q8N4S9 558 aa13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 GOLM1Q8NBJ4 401 aa13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 OR2L5Q8NG80 312 aa13.21□□□□□ -0.29
SMARCD2-205ENST00000577686 OR2M7Q8NG81 312 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms