RNA–Protein interactions for RNA: ENST00000577667.1

PPP4R1-205, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-205ENST00000577667 HOGA1Q86XE5 327 aa2.82□□□□□ -1.96
PPP4R1-205ENST00000577667 ECHDC2Q86YB7 292 aa2.82□□□□□ -1.96
PPP4R1-205ENST00000577667 WDTC1Q8N5D0 677 aa2.82□□□□□ -1.96
PPP4R1-205ENST00000577667 NIPA2Q8N8Q9 360 aa2.82□□□□□ -1.96
PPP4R1-205ENST00000577667 CEP295NLQ96MC4 621 aa2.82□□□□□ -1.96
PPP4R1-205ENST00000577667 USP28Q96RU2 1077 aa2.82□□□□□ -1.96
PPP4R1-205ENST00000577667 SRSF8Q9BRL6 282 aaKnown RBP2.82□□□□□ -1.96
PPP4R1-205ENST00000577667 MRPL9Q9BYD2 267 aaKnown RBP2.82□□□□□ -1.96
PPP4R1-205ENST00000577667 NT5C3AQ9H0P0 336 aa2.82□□□□□ -1.96
PPP4R1-205ENST00000577667 AZI2Q9H6S1 392 aa2.82□□□□□ -1.96
PPP4R1-205ENST00000577667 CHMP1AQ9HD42 196 aaPredicted RBP2.82□□□□□ -1.96
PPP4R1-205ENST00000577667 TBC1D13Q9NVG8 400 aa2.82□□□□□ -1.96
PPP4R1-205ENST00000577667 ORC3Q9UBD5 711 aaPredicted RBP2.82□□□□□ -1.96
PPP4R1-205ENST00000577667 RAB23Q9ULC3 237 aa2.82□□□□□ -1.96
PPP4R1-205ENST00000577667 EXO1Q9UQ84 846 aaKnown RBP2.82□□□□□ -1.96
PPP4R1-205ENST00000577667 ZMYM6O95789 1325 aa2.82□□□□□ -1.96
PPP4R1-205ENST00000577667 NF1P21359 2839 aa2.82□□□□□ -1.96
PPP4R1-205ENST00000577667 NIPBLQ6KC79 2804 aaeCLIP2.82□□□□□ -1.96
PPP4R1-205ENST00000577667 PTPRBP23467 1997 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 IGKV6D-21A0A0A0MT36 114 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 HYKKA2RU49 373 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 MEIS2O14770 477 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 TPD52L2O43399 206 aaKnown RBP2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 SSX4O60224 188 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 CSDE1O75534 798 aaKnown RBP2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 DDHD2O94830 711 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 C22orf31O95567 290 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 CCNE2O96020 404 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 ZSCAN5DPP0CG00 497 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 PCP11498 1178 aaKnown RBP2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 SRSF5Q13243 272 aaKnown RBP2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 ITGB3BPQ13352 177 aaPredicted RBP2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 SIM2Q14190 667 aaPredicted RBP2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 SF3A2Q15428 464 aaKnown RBP2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 KLHL26Q53HC5 615 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 SNX30Q5VWJ9 437 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 MMS22LQ6ZRQ5 1243 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 GPRIN3Q6ZVF9 776 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 PTAR1Q7Z6K3 402 aaPredicted RBP2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 IQCA1Q86XH1 822 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 CCDC60Q8IWA6 550 aaPredicted RBP2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 KIRREL3Q8IZU9 778 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 TRIML1Q8N9V2 468 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 UCMAQ8WVF2 138 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 ESR2Q92731 530 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 AZIN2Q96A70 460 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 CDHR1Q96JP9 859 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 OR6C1Q96RD1 312 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 FNBP1Q96RU3 617 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 ITPAQ9BY32 194 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 WWTR1Q9GZV5 400 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 RNF41Q9H4P4 317 aaPredicted RBP2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 DCTPP1Q9H773 170 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 MRPL17Q9NRX2 175 aaKnown RBP2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 OSER1Q9NX31 292 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 NUDT4Q9NZJ9 180 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 AASSQ9UDR5 926 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 PPP1R3CQ9UQK1 317 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 ANGPTL3Q9Y5C1 460 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 UBIAD1Q9Y5Z9 338 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 TTC41PQ6P2S7 1318 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 COL1A2P08123 1366 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 PTPRDP23468 1912 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 ADAMTS9Q9P2N4 1935 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 ZNF638Q14966 1978 aaKnown RBP2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 PDZD2O15018 2839 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 VPS13CQ709C8 3753 aa2.81□□□□□ -1.96
PPP4R1-205ENST00000577667 ADGRG4Q8IZF6 3080 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 CEP192Q8TEP8 1941 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 MYO16Q9Y6X6 1858 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 NFASCO94856 1347 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 CDRT15L2A8MXV6 281 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 B4E171 279 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 DFFBO76075 338 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 SCGB1D1O95968 90 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 ZNF806P0C7X5 589 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 MMP9P14780 707 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 DARSP14868 501 aaKnown RBP2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 SLC6A6P31641 620 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 MAN1A1P33908 653 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 OPRL1P41146 370 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 TSPAN7P41732 249 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 SLC26A2P50443 739 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 NOVA1P51513 510 aaKnown RBP2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 GPC3P51654 580 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 PAX9P55771 341 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 GSCP56915 257 aaPredicted RBP2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 NLRP11P59045 1033 aaKnown RBP2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 HERV-K104P61576 105 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 NTHL1P78549 312 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 MAMLD1Q13495 774 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 MCMDC2Q4G0Z9 681 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 ZNF343Q6P1L6 599 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 Q6ZRP5 223 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 SMC5Q8IY18 1101 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 Q8N377 158 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 METTL13Q8N6R0 699 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 OR13J1Q8NGT2 312 aa2.8□□□□□ -1.96
PPP4R1-205ENST00000577667 OR2L2Q8NH16 312 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms