RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 SEMA4BQ9NPR2 832 aaPredicted RBP9.38□□□□□ -0.91
NPLOC4-220ENST00000576940 INTS10Q9NVR2 710 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-220ENST00000576940 TRMT1Q9NXH9 659 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-220ENST00000576940 KLHL42Q9P2K6 505 aa9.38□□□□□ -0.91
NPLOC4-220ENST00000576940 NSD1Q96L73 2696 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 MYOCOSA0A1B0GUC4 107 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 TRBC2A0A5B9 178 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 C4orf51C9J302 202 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 TGFBR3LH3BV60 316 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 AP3B1O00203 1094 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 AQP7O14520 342 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 ZNF354AO60765 605 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 WDR1O75083 606 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 LY6G6DO95868 133 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 RNH1P13489 461 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 DEKP35659 375 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 SCTRP47872 440 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 KCNJ1P48048 391 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 MAN2A2P49641 1150 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 SKP1P63208 163 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 TIAL1Q01085 375 aaKnown RBP eCLIP9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 RGS1Q08116 209 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 RUNX2Q13950 521 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 DHX34Q14147 1143 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 DAZAP2Q15038 168 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 PHKG1Q16816 387 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 FLYWCH1Q4VC44 716 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 WLSQ5T9L3 541 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 NDUFAF5Q5TEU4 345 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 FBXW10Q5XX13 1052 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 ZNF470Q6ECI4 717 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 ABHD13Q7L211 337 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 KRTAP1-3Q8IUG1 177 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 SYCE1Q8N0S2 351 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 FAM109AQ8N4B1 249 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 RELL2Q8NC24 303 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 TMEM52Q8NDY8 209 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 ARMC2Q8NEN0 867 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 LINC01560Q8TB33 94 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 FAM222BQ8WU58 562 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 KCNJ9Q92806 393 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 SCYL1Q96KG9 808 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 CAPZA3Q96KX2 299 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 RASL10BQ96S79 203 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 CCDC77Q9BR77 488 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 FRMD8P1Q9BZ68 369 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 AICDAQ9GZX7 198 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 EXO5Q9H790 373 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 PLEKHF2Q9H8W4 249 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 IL1RL2Q9HB29 575 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 PARVBQ9HBI1 364 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 TUBA8Q9NY65 449 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 SPRR3Q9UBC9 169 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 MYOTQ9UBF9 498 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 ZFP69BQ9UJL9 534 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 PPIEQ9UNP9 301 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 VPS9D1Q9Y2B5 631 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 CLDN16Q9Y5I7 305 aa9.37□□□□□ -0.91
NPLOC4-220ENST00000576940 A0A0G2JN53 185 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 KDM4EB2RXH2 506 aaPredicted RBP9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 IPO7O95373 1038 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 HEXAP06865 529 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 ENDOUP21128 410 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 BMP5P22003 454 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 CCND1P24385 295 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 TACR1P25103 407 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 PCSK6P29122 969 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 HNRNPFP52597 415 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 WNT3P56703 355 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 BTN3A2P78410 334 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 NKX6-1P78426 367 aaPredicted RBP9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 FOXO1Q12778 655 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 THOC5Q13769 683 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 BMPR2Q13873 1038 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 SIX1Q15475 284 aaPredicted RBP9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 RIPPLY2Q5TAB7 128 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 SEL1L2Q5TEA6 688 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 NIPAL1Q6NVV3 410 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 CASC4Q6P4E1 433 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 FAM47EQ6ZV65 393 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 KIAA1328Q86T90 577 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 GPALPP1Q8IXQ4 340 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 ZNF321PQ8N8H1 164 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 ANKRD53Q8N9V6 530 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 NAXEQ8NCW5 288 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 KIAA1191Q96A73 305 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 ZNF669Q96BR6 464 aaPredicted RBP9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 SARAFQ96BY9 339 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 NDNQ99608 321 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 SH3GL2Q99962 352 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 FAM173AQ9BQD7 235 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 HAUS8Q9BT25 410 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 REPIN1Q9BWE0 567 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 TSGA10Q9BZW7 698 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 ZNF395Q9H8N7 513 aaPredicted RBP9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 PRTFDC1Q9NRG1 225 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 SAMD15Q9P1V8 674 aa9.36□□□□□ -0.91
NPLOC4-220ENST00000576940 ANK3Q12955 4377 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 TRGV5A0A0B4J1U4 118 aa9.35□□□□□ -0.91
NPLOC4-220ENST00000576940 ZCWPW2A0A1B0GU75 182 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 329.9 ms