RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 LRR1Q96L50 414 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 CMAHPQ9Y471 501 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 INMT-MINDY4F8WBC2 141 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 SLC16A8O95907 504 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 ACRV1P26436 265 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 SLC6A4P31645 630 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 OMPP47874 163 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 CLCNKAP51800 687 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 OTUD1Q5VV17 481 aaPredicted RBP17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 FAM171BQ6P995 826 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 DCAF4L2Q8NA75 395 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 NT5C3BQ969T7 300 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 GINS4Q9BRT9 223 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 WNT6Q9Y6F9 365 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 SEC16AO15027 2179 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 ZNF840PA6NDX5 716 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 CLCA1A8K7I4 914 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 E2F3O00716 465 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 INPPL1O15357 1258 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 CEP68Q76N32 757 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 NCSTNQ92542 709 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 MND1Q9BWT6 205 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 ACOT13Q9NPJ3 140 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 TNFRSF10DQ9UBN6 386 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 ZFR2Q9UPR6 939 aaKnown RBP17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 COL18A1P39060 1754 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 BCORQ6W2J9 1755 aa17.2■□□□□ 0.34
ATPAF1-214ENST00000576409 LRRC72A6NJI9 287 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 J3QLW9 94 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 MMP20O60882 483 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 MRPL3P09001 348 aaKnown RBP17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 ZNF19P17023 458 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 STARP49675 285 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 CRISP1P54107 249 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 GABARAPL2P60520 117 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 Q8N402 240 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 CELF5Q8N6W0 485 aaKnown RBP17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 TMEM145Q8NBT3 493 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 SYT17Q9BSW7 474 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 REEP4Q9H6H4 257 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 SIAEQ9HAT2 523 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 POLR1DQ9Y2S0 133 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 LOC285095A0A1B0GVY8 99 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 ZSCAN5BA6NJL1 495 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 E7EQ34 232 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 PITPNM1O00562 1244 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 AQP9O43315 295 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 SCN2BO60939 215 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 UPK1BO75841 260 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 OR12D1P0DN82 309 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 MAGEA12P43365 314 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 SEMA3BQ13214 749 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 ODF4Q2M2E3 257 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 BEND5Q7L4P6 421 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 SERINC5Q86VE9 423 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 PHC2Q8IXK0 858 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 ELMOD2Q8IZ81 293 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 OR6Q1Q8NGQ2 317 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 CHPT1Q8WUD6 406 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 TFGQ92734 400 aaPredicted RBP17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 C17orf62Q9BQA9 187 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 RACGAP1Q9H0H5 632 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 ID2Q02363 134 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 LARS2Q15031 903 aaKnown RBP17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 ZNF181Q2M3W8 571 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 PROX2Q3B8N5 592 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 ADPRMQ3LIE5 342 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 LEXMQ3ZCV2 418 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 RPS26P11Q5JNZ5 115 aaPredicted RBP17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 FAM92BQ6ZTR7 304 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 AMZ2Q86W34 360 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 FAM83FQ8NEG4 500 aaPredicted RBP17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 NANSQ9NR45 359 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 SEC14L4Q9UDX3 406 aa17.19■□□□□ 0.34
ATPAF1-214ENST00000576409 CDKN2CP42773 168 aa17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 TMEM115Q12893 351 aaPredicted RBP17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 ZNF630Q2M218 657 aaPredicted RBP17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 BCL7AQ4VC05 210 aa17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 ZNF311Q5JNZ3 666 aa17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 ZDHHC20Q5W0Z9 365 aa17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 PSRC1Q6PGN9 363 aaPredicted RBP17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 CCDC116Q8IYX3 515 aa17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 GABRQQ9UN88 632 aa17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 A0A1W2PQL4 384 aaPredicted RBP17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 CD8B2A6NJW9 211 aa17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 RETP07949 1114 aa17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 CD8BP10966 210 aa17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 PSMD4P55036 377 aaKnown RBP17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 PIN1Q13526 163 aaPredicted RBP17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 GTF2IRD2BQ6EKJ0 949 aa17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 C22orf39Q6P5X5 142 aa17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 TMCO2Q7Z6W1 182 aaPredicted RBP17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 GTF2IRD2Q86UP8 949 aa17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 ZNF461Q8TAF7 563 aa17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 GRHL3Q8TE85 626 aa17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 F2RL3Q96RI0 385 aa17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 XKR8Q9H6D3 395 aa17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 PRELID1Q9Y255 219 aa17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 SHROOM3Q8TF72 1996 aa17.18■□□□□ 0.34
ATPAF1-214ENST00000576409 C1QTNF3-AMACRE9PGA6 284 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms