RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 ZNF282Q9UDV7 671 aaPredicted RBP10.04□□□□□ -0.8
LITAF-216ENST00000574848 CDC14AQ9UNH5 594 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 MAP4K5Q9Y4K4 846 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 NBASA2RRP1 2371 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 A6NL46 340 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 CAPN14A8MX76 684 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 UBXN8O00124 270 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 PCDH17O14917 1159 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 FOXS1O43638 330 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 VPS4BO75351 444 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 EIF2S1P05198 315 aaKnown RBP10.03□□□□□ -0.8
LITAF-216ENST00000574848 ENO1P06733 434 aaKnown RBP10.03□□□□□ -0.8
LITAF-216ENST00000574848 CYC1P08574 325 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 ENO2P09104 434 aaPredicted RBP10.03□□□□□ -0.8
LITAF-216ENST00000574848 ZGLP1P0C6A0 271 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 T-ENOLP0DO92 83 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 VARSP26640 1264 aaKnown RBP10.03□□□□□ -0.8
LITAF-216ENST00000574848 RPS15AP62244 130 aaKnown RBP10.03□□□□□ -0.8
LITAF-216ENST00000574848 ELF3P78545 371 aaPredicted RBP10.03□□□□□ -0.8
LITAF-216ENST00000574848 OCA2Q04671 838 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 KLC1Q07866 573 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 RIPK1Q13546 671 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 TSTA3Q13630 321 aaPredicted RBP10.03□□□□□ -0.8
LITAF-216ENST00000574848 MAPRE2Q15555 327 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 PDCD2Q16342 344 aaPredicted RBP10.03□□□□□ -0.8
LITAF-216ENST00000574848 RBBP7Q16576 425 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 PHKG1Q16816 387 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 ZXDCQ2QGD7 858 aaPredicted RBP10.03□□□□□ -0.8
LITAF-216ENST00000574848 SLC9B1Q4ZJI4 515 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 CDKL4Q5MAI5 379 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 C6orf163Q5TEZ5 329 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 NXNQ6DKJ4 435 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 AGTRAPQ6RW13 159 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 LCTLQ6UWM7 567 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 IGFL2Q6UWQ7 119 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 MAVSQ7Z434 540 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 VN1R4Q7Z5H5 301 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 ATCAYQ86WG3 371 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 CLYBLQ8N0X4 340 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 METTL27Q8N6F8 245 aaPredicted RBP10.03□□□□□ -0.8
LITAF-216ENST00000574848 TEX9Q8N6V9 391 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 GALNT11Q8NCW6 608 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 OR11G2Q8NGC1 345 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 CPT1CQ8TCG5 803 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 ACTRT2Q8TDY3 377 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 TM9SF4Q92544 642 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 MIEF2Q96C03 454 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 THAP11Q96EK4 314 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 CRB3Q9BUF7 120 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 SARGQ9BW04 601 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 TRIM54Q9BYV2 358 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 NUF2Q9BZD4 464 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 C1orf21Q9H246 121 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 SOX17Q9H6I2 414 aaPredicted RBP10.03□□□□□ -0.8
LITAF-216ENST00000574848 ARL8BQ9NVJ2 186 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 ARMCX1Q9P291 453 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 ZDHHC2Q9UIJ5 367 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 MAU2Q9Y6X3 613 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 LRRK2Q5S007 2527 aa10.03□□□□□ -0.8
LITAF-216ENST00000574848 DOCK10Q96BY6 2186 aa10.02□□□□□ -0.8
LITAF-216ENST00000574848 TTLL8A6PVC2 850 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 E9PBE3 544 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 H0YIG0 161 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 H7BY64 318 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 CDC7O00311 574 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 WFS1O76024 890 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 HPP00738 406 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 FGF4P08620 206 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 RPS17P08708 135 aaKnown RBP10.02□□□□□ -0.81
LITAF-216ENST00000574848 MTHFD2P13995 350 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 EEF1DP29692 281 aaKnown RBP10.02□□□□□ -0.81
LITAF-216ENST00000574848 PIK3CGP48736 1102 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 PKNOX1P55347 436 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 KCNJ2P63252 427 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 CSNK1G2P78368 415 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 SRSF1Q07955 248 aaKnown RBP eCLIP10.02□□□□□ -0.81
LITAF-216ENST00000574848 RAPSNQ13702 412 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 HERC3Q15034 1050 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 SNCBQ16143 134 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 PPP1R3AQ16821 1122 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 UNC50Q53HI1 259 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 THEMIS2Q5TEJ8 643 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 ATG9BQ674R7 924 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 SBSNQ6UWP8 590 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 MBOAT1Q6ZNC8 495 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 Q6ZS92 163 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 PARP9Q8IXQ6 854 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 TCAIMQ8N3R3 496 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 KIF2BQ8N4N8 673 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 CPSF7Q8N684 471 aaKnown RBP10.02□□□□□ -0.81
LITAF-216ENST00000574848 ABHD11Q8NFV4 315 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 OR56A3Q8NH54 315 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 COL26A1Q96A83 441 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 FBXL8Q96CD0 374 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 SLC7A6OSQ96CW6 309 aaPredicted RBP10.02□□□□□ -0.81
LITAF-216ENST00000574848 TM4SF19Q96DZ7 209 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 MAELQ96JY0 434 aaKnown RBP10.02□□□□□ -0.81
LITAF-216ENST00000574848 PRAP1Q96NZ9 151 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 MEAF6Q9HAF1 191 aa10.02□□□□□ -0.81
LITAF-216ENST00000574848 MID1IP1Q9NPA3 183 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms