RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 HBA1P69905 142 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 RHAGQ02094 409 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 SREBF2Q12772 1141 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 TP53BP2Q13625 1128 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 MPP7Q5T2T1 576 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 MEDAGQ5VYS4 303 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 TXNDC8Q6A555 127 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 GATAD2AQ86YP4 633 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 RAVER1Q8IY67 606 aaKnown RBP10.31□□□□□ -0.76
CCDC40-207ENST00000572253 GOT1L1Q8NHS2 421 aaPredicted RBP10.31□□□□□ -0.76
CCDC40-207ENST00000572253 MRPS31Q92665 395 aaKnown RBP10.31□□□□□ -0.76
CCDC40-207ENST00000572253 ECHDC3Q96DC8 303 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 FBXL12Q9NXK8 326 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 CFAP97Q9P2B7 532 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 PCDHGB2Q9Y5G2 931 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 UGT2B17O75795 530 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 SLCO2B1O94956 709 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 ELNP15502 786 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 CBLP22681 906 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 STK19P49842 368 aaPredicted RBP10.31□□□□□ -0.76
CCDC40-207ENST00000572253 IFITM2Q01629 132 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 CRB2Q5IJ48 1285 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 ATAD3CQ5T2N8 411 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 CLSTN3Q9BQT9 956 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 C11orf16Q9NQ32 467 aa10.31□□□□□ -0.76
CCDC40-207ENST00000572253 ARRDC5A6NEK1 342 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 ZAR1LA6NP61 321 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 J3KTA2 159 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 CAPN5O15484 640 aaPredicted RBP10.3□□□□□ -0.76
CCDC40-207ENST00000572253 GPR37L1O60883 481 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 PSIP1O75475 530 aaKnown RBP10.3□□□□□ -0.76
CCDC40-207ENST00000572253 CYP7B1O75881 506 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 ETHE1O95571 254 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 SCG5P05408 212 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 ZNF30P17039 623 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 CHMP24386 653 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 BMPR1AP36894 532 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 HTR3AP46098 478 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 HMGA2P52926 109 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 CRISP3P54108 245 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 DAB2P98082 770 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 SCN1BQ07699 218 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 ZNF284Q2VY69 593 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 CYP27C1Q4G0S4 372 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 LRRC73Q5JTD7 316 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 SPOUT1Q5T280 376 aaKnown RBP10.3□□□□□ -0.76
CCDC40-207ENST00000572253 GALNT6Q8NCL4 622 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 LILRB4Q8NHJ6 448 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 TMEM80Q96HE8 168 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 IL4I1Q96RQ9 567 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 MND1Q9BWT6 205 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 NLNQ9BYT8 704 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 CPEB1Q9BZB8 566 aaKnown RBP10.3□□□□□ -0.76
CCDC40-207ENST00000572253 UCK2Q9BZX2 261 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 NMNAT1Q9HAN9 279 aaPredicted RBP10.3□□□□□ -0.76
CCDC40-207ENST00000572253 MRPL17Q9NRX2 175 aaKnown RBP10.3□□□□□ -0.76
CCDC40-207ENST00000572253 RPL36Q9Y3U8 105 aaKnown RBP10.3□□□□□ -0.76
CCDC40-207ENST00000572253 CENPBD1B2RD01 187 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 TMEM229AB2RXF0 380 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 MYL12BO14950 172 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 GPX5O75715 221 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 ABLIM3O94929 683 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 ADAP00813 363 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 XPAP23025 273 aaPredicted RBP10.3□□□□□ -0.76
CCDC40-207ENST00000572253 BDKRB1P46663 353 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 SPHARQ15513 63 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 CST9Q5W186 159 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 ZNF852Q6ZMS4 543 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.3□□□□□ -0.76
CCDC40-207ENST00000572253 ASCC1Q8N9N2 400 aaKnown RBP10.3□□□□□ -0.76
CCDC40-207ENST00000572253 C11orf24Q96F05 449 aaPredicted RBP10.3□□□□□ -0.76
CCDC40-207ENST00000572253 PHOX2BQ99453 314 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 EFCAB11Q9BUY7 163 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 SNTG1Q9NSN8 517 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 N6AMT1Q9Y5N5 214 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 A0A1W2PRB8 838 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 ATG13O75143 517 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 ARAFP10398 606 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 DSTNP60981 165 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 ZNF385BQ569K4 471 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.3□□□□□ -0.76
CCDC40-207ENST00000572253 C19orf48Q6RUI8 117 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 KLHL17Q6TDP4 642 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 NRARPQ7Z6K4 114 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 NLGN4XQ8N0W4 816 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 CPXM2Q8N436 756 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 OR6F1Q8NGZ6 308 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 C17orf50Q8WW18 174 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 MIEF1Q9NQG6 463 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 FTSJ1Q9UET6 329 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 MBD1Q9UIS9 605 aaPredicted RBP10.3□□□□□ -0.76
CCDC40-207ENST00000572253 ACSL6Q9UKU0 697 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 STUB1Q9UNE7 303 aa10.3□□□□□ -0.76
CCDC40-207ENST00000572253 LINC00854A0A1B0GVQ3 168 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 H3BN98 237 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 ZNF821O75541 412 aaPredicted RBP10.29□□□□□ -0.76
CCDC40-207ENST00000572253 ZNF8P17098 575 aaPredicted RBP10.29□□□□□ -0.76
CCDC40-207ENST00000572253 DPY19L3Q6ZPD9 716 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 COMMD6Q7Z4G1 85 aa10.29□□□□□ -0.76
CCDC40-207ENST00000572253 ATCAYQ86WG3 371 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms