RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 DMBX1Q8NFW5 382 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 UCMAQ8WVF2 138 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 TMA16Q96EY4 203 aaKnown RBP3.79□□□□□ -1.8
NUP88-202ENST00000570937 PERPQ96FX8 193 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 C7orf26Q96N11 449 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 SLC2A11Q9BYW1 496 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 EDEM3Q9BZQ6 932 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 HPS4Q9NQG7 708 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 SEPT11Q9NVA2 429 aaKnown RBP3.79□□□□□ -1.8
NUP88-202ENST00000570937 OSER1Q9NX31 292 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 OR14J1Q9UGF5 321 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 RAB23Q9ULC3 237 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 PLA2G4CQ9UP65 541 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 KLHL20Q9Y2M5 609 aa3.79□□□□□ -1.8
NUP88-202ENST00000570937 MTF2Q9Y483 593 aaPredicted RBP3.79□□□□□ -1.8
NUP88-202ENST00000570937 BZW2Q9Y6E2 419 aaKnown RBP3.79□□□□□ -1.8
NUP88-202ENST00000570937 A0A1W2PP11 408 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 CCDC189A1A4V9 331 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 FAM72CH0Y354 149 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 HS3ST1O14792 307 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 ANKRD28O15084 1053 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 PAPSS1O43252 624 aaPredicted RBP3.78□□□□□ -1.8
NUP88-202ENST00000570937 HCRTR2O43614 444 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 CREB3O43889 395 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 CACNG3O60359 315 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 SOCS5O75159 536 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 SLC25A12O75746 678 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 CCNDBP1O95273 360 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 MOCS3O95396 460 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 APBB3O95704 486 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 MLYCDO95822 493 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 TRUB2O95900 331 aaKnown RBP3.78□□□□□ -1.8
NUP88-202ENST00000570937 CALB1P05937 261 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 ATP5BP06576 529 aaKnown RBP3.78□□□□□ -1.8
NUP88-202ENST00000570937 ZNF23P17027 643 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 POLR2CP19387 275 aaPredicted RBP3.78□□□□□ -1.8
NUP88-202ENST00000570937 TNFAIP3P21580 790 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 CDH5P33151 784 aaPredicted RBP3.78□□□□□ -1.8
NUP88-202ENST00000570937 NBL1P41271 181 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 MATKP42679 507 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 PGFP49763 221 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 UBASH3AP57075 661 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 MRPS34P82930 218 aaKnown RBP3.78□□□□□ -1.8
NUP88-202ENST00000570937 RUNX1T1Q06455 604 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 CDH18Q13634 790 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 TBCEQ15813 527 aaPredicted RBP3.78□□□□□ -1.8
NUP88-202ENST00000570937 TSTQ16762 297 aaKnown RBP3.78□□□□□ -1.8
NUP88-202ENST00000570937 KRTCAP3Q53RY4 240 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 RABGAP1LQ5R372 815 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 OTUD3Q5T2D3 398 aaPredicted RBP3.78□□□□□ -1.8
NUP88-202ENST00000570937 PDSS1Q5T2R2 415 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 FAM72AQ5TYM5 149 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 SFMBT2Q5VUG0 894 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 TAF3Q5VWG9 929 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 FAM72DQ6L9T8 149 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 CYP20A1Q6UW02 462 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 LRRC31Q6UY01 552 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 TPGS1Q6ZTW0 290 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 KCTD8Q6ZWB6 473 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 SLC26A9Q7LBE3 791 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 LUZP1Q86V48 1076 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 LONP2Q86WA8 852 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 FAM72BQ86X60 149 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 ARHGAP12Q8IWW6 846 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 WDTC1Q8N5D0 677 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 ATP6V0D2Q8N8Y2 350 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 HJURPQ8NCD3 748 aaPredicted RBP3.78□□□□□ -1.8
NUP88-202ENST00000570937 PRSS33Q8NF86 280 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 SLC24A4Q8NFF2 622 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 TSTD1Q8NFU3 115 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 RPLP0P6Q8NHW5 317 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 HMGCLL1Q8TB92 370 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 LRRC8CQ8TDW0 803 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 SYN2Q92777 582 aaPredicted RBP3.78□□□□□ -1.8
NUP88-202ENST00000570937 BTN2A3PQ96KV6 586 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 CPXM1Q96SM3 734 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 AGPAT1Q99943 283 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 TSPY26PQ9H489 355 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 RANGRFQ9HD47 186 aaPredicted RBP3.78□□□□□ -1.8
NUP88-202ENST00000570937 ACP6Q9NPH0 428 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 PRMT8Q9NR22 394 aaPredicted RBP3.78□□□□□ -1.8
NUP88-202ENST00000570937 DNAJC17Q9NVM6 304 aaKnown RBP3.78□□□□□ -1.8
NUP88-202ENST00000570937 ZNHIT6Q9NWK9 470 aaKnown RBP3.78□□□□□ -1.8
NUP88-202ENST00000570937 DDIT4Q9NX09 232 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.78□□□□□ -1.8
NUP88-202ENST00000570937 CWC15Q9P013 229 aaKnown RBP3.78□□□□□ -1.8
NUP88-202ENST00000570937 POLG2Q9UHN1 485 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 ERRFI1Q9UJM3 462 aaPredicted RBP3.78□□□□□ -1.8
NUP88-202ENST00000570937 STOML2Q9UJZ1 356 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 TCF19Q9Y242 345 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.78□□□□□ -1.8
NUP88-202ENST00000570937 KCNE2Q9Y6J6 123 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 DOCK8Q8NF50 2099 aa3.78□□□□□ -1.8
NUP88-202ENST00000570937 TECTAO75443 2155 aa3.78□□□□□ -1.81
NUP88-202ENST00000570937 KIF26BQ2KJY2 2108 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 NUP210Q8TEM1 1887 aaPredicted RBP3.77□□□□□ -1.81
NUP88-202ENST00000570937 DOCK6Q96HP0 2047 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 SYNJ2BP-COX16A0A087WUM0 186 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 C1orf226A1L170 272 aa3.77□□□□□ -1.81
NUP88-202ENST00000570937 SHISA7A6NL88 538 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms