RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 HRKO00198 91 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 LIN7AO14910 233 aaPredicted RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 ADAMDEC1O15204 470 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 CAPN5O15484 640 aaPredicted RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 COCHO43405 550 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 B4GAT1O43505 415 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 MFSD11O43934 449 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 LPXNO60711 386 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 USP12O75317 370 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 SNNO75324 88 aaPredicted RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 AVILO75366 819 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 RASSF9O75901 435 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 PIAS1O75925 651 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 KDM4BO94953 1096 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 TJP3O95049 919 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 LUC7L3O95232 432 aaKnown RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 SLC16A8O95907 504 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 CXCL10P02778 98 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 RLN1P04808 185 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 FABP1P07148 127 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 THBDP07204 575 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 SERPINA6P08185 405 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 INHBBP09529 407 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 C1SP09871 688 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 OR4E1P0C645 316 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 FAM90A15PP0C7V4 464 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 FAM90A14PP0C7W9 464 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 FTH1P19P0C7X4 201 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 COX7A2P14406 83 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 CEBPBP17676 345 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 KRT15P19012 456 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 ZNF10P21506 573 aaPredicted RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 UCP1P25874 307 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 RBL1P28749 1068 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 HMOX2P30519 316 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 RPL22P35268 128 aaKnown RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 PCK1P35558 622 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 SOX18P35713 384 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 MATKP42679 507 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 CDKN2CP42773 168 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 KIR3DL2P43630 455 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 CDC34P49427 236 aaPredicted RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 PNLIPRP2P54317 469 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 PER3P56645 1201 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 SRP54P61011 504 aaKnown RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 RPS15P62841 145 aaKnown RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 CSNK1G2P78368 415 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 GALK2Q01415 458 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 ZP2Q05996 745 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 ZNF33BQ06732 778 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 ZNF844Q08AG5 666 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 UBAP2LQ14157 1087 aaKnown RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 ITIH4Q14624 930 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 HEPACAMQ14CZ8 416 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 SHBQ15464 509 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 ADRM1Q16186 407 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 P3H1Q32P28 736 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 GALNTL6Q49A17 601 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 CCDC58Q4VC31 144 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 KHDC1Q4VXA5 237 aaKnown RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 PDLIM3Q53GG5 364 aaPredicted RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 CDKL4Q5MAI5 379 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 TCHHL1Q5QJ38 904 aaPredicted RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 C6orf136Q5SQH8 315 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 PRAMEF8Q5VWM4 474 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 NKAIN2Q5VXU1 208 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 BTBD8Q5XKL5 378 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 NCBP2-AS2Q69YL0 99 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 FAM109BQ6ICB4 259 aaPredicted RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 RGS7BPQ6MZT1 257 aaPredicted RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 KIAA1841Q6NSI8 718 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 MRNIPQ6NTE8 343 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 FUT10Q6P4F1 479 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 NHLRC1Q6VVB1 395 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 GSTA5Q7RTV2 222 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 ANKRD33Q7Z3H0 272 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 RD3Q7Z3Z2 195 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 POLNQ7Z5Q5 900 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 SCD5Q86SK9 330 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 ADAMTSL2Q86TH1 951 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 TRIM69Q86WT6 500 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 FAM129CQ86XR2 697 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 PHYKPLQ8IUZ5 450 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 NUDCD3Q8IVD9 361 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 FIBCD1Q8N539 461 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 NPWQ8N729 165 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 DNAJC5GQ8N7S2 189 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 MAB21L3Q8N8X9 362 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 L3MBTL4Q8NA19 623 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 FAM47BQ8NA70 645 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 C19orf18Q8NEA5 215 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 OR9K2Q8NGE7 335 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 OR52B4Q8NGK2 314 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 OR6Q1Q8NGQ2 317 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 OR13C3Q8NGS6 347 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 DTX3LQ8TDB6 740 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 RNASE8Q8TDE3 154 aaKnown RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 DQX1Q8TE96 717 aaKnown RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 GPX8Q8TED1 209 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 WDR60Q8WVS4 1066 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms