RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 SLC32A1Q9H598 525 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 DBNDD1Q9H9R9 158 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 NANSQ9NR45 359 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 AGO1Q9UL18 857 aaKnown RBP6.87□□□□□ -1.31
CNOT1-216ENST00000569240 MAFFQ9ULX9 164 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 CHD2O14647 1828 aaKnown RBP6.87□□□□□ -1.31
CNOT1-216ENST00000569240 ITSN1Q15811 1721 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 BMP4P12644 408 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 PGAM2P15259 253 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 CD1EP15812 388 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 ZP3P21754 424 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 NSG1P42857 185 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 GRK6P43250 576 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 CAMK2DQ13557 499 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 CES5AQ6NT32 575 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 UNC5DQ6UXZ4 953 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 TRMT11Q7Z4G4 463 aaKnown RBP6.87□□□□□ -1.31
CNOT1-216ENST00000569240 AGBL3Q8NEM8 1001 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 POC1BQ8TC44 478 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF566Q969W8 418 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 TMIGD2Q96BF3 282 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 PRRT1Q99946 306 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 SAP130Q9H0E3 1048 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 CDT1Q9H211 546 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 SLCO5A1Q9H2Y9 848 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 NELFAQ9H3P2 528 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 FZD10Q9ULW2 581 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 TRAPPC4Q9Y296 219 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 DLGAP4Q9Y2H0 992 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 FAM230AA0A1W2PPH8 454 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 RFXAPO00287 272 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 SMIM18P0DKX4 95 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 PTPRAP18433 802 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 CD34P28906 385 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 FRKP42685 505 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-216ENST00000569240 UBXN2BQ14CS0 331 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 TMEM41BQ5BJD5 291 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 MSANTD2Q6P1R3 559 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 FAM111BQ6SJ93 734 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 ARL9Q6T311 187 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 NPAS3Q8IXF0 933 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 ELF4Q99607 663 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-216ENST00000569240 CCDC3Q9BQI4 270 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 HOXD1Q9GZZ0 328 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 MINDY3Q9H8M7 445 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 POLE4Q9NR33 117 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 LIPT1Q9Y234 373 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 ADAM18Q9Y3Q7 739 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 TARBP1Q13395 1621 aaKnown RBP6.87□□□□□ -1.31
CNOT1-216ENST00000569240 MEIS2O14770 477 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 RNF13O43567 381 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 ATG12O94817 140 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 GIPP09681 153 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF26P17031 533 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-216ENST00000569240 IL1R2P27930 398 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 RPIAP49247 311 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 PCK2Q16822 640 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 SPRED3Q2MJR0 410 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 CATSPERGQ6ZRH7 1159 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 TMEM200AQ86VY9 491 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 LSMEM2Q8N112 164 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 COMMD1Q8N668 190 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 VGLL2Q8N8G2 317 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF454Q8N9F8 522 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 TMEM102Q8N9M5 508 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-216ENST00000569240 B3GNT7Q8NFL0 401 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 SMARCD2Q92925 531 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 MARC2Q969Z3 335 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 ISL2Q96A47 359 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.87□□□□□ -1.31
CNOT1-216ENST00000569240 PCDHA2Q9Y5H9 948 aa6.87□□□□□ -1.31
CNOT1-216ENST00000569240 CACNA1FO60840 1977 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 TP53P04637 393 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-216ENST00000569240 SPI1P17947 270 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 RPL10P27635 214 aaKnown RBP6.86□□□□□ -1.31
CNOT1-216ENST00000569240 TNFSF8P32971 234 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 NKX2-5P52952 324 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-216ENST00000569240 PPP1R3AQ16821 1122 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 C6orf136Q5SQH8 315 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 VSIG10LQ86VR7 867 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 SLC43A2Q8N370 569 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 GLIS3Q8NEA6 775 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 SLC16A10Q8TF71 515 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 TSGA13Q96PP4 275 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 MYOCQ99972 504 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 AARSD1Q9BTE6 412 aaKnown RBP6.86□□□□□ -1.31
CNOT1-216ENST00000569240 ERVK13-1Q9NX77 482 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 TIMM22Q9Y584 194 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 IQCMA0A1B0GVH7 501 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 FKTNO75072 461 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 UGT2B7P16662 529 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 ADORA2AP29274 412 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 S100A11P31949 105 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 BRCC3P46736 316 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 CAMLGP49069 296 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 RAB13P51153 203 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 VSX2P58304 361 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-216ENST00000569240 VARS2Q5ST30 1063 aaKnown RBP6.86□□□□□ -1.31
CNOT1-216ENST00000569240 MFSD14CQ5VZR4 134 aa6.86□□□□□ -1.31
CNOT1-216ENST00000569240 RPL22L1Q6P5R6 122 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms