RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 LARP4Q71RC2 724 aaKnown RBP eCLIP11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 MAVSQ7Z434 540 aa11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 ATCAYQ86WG3 371 aa11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 SDR16C5Q8N3Y7 309 aa11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 SHKBP1Q8TBC3 707 aa11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 UPF1Q92900 1129 aaKnown RBP eCLIP11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 FATE1Q969F0 183 aa11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 C12orf42Q96LP6 360 aa11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 PIP5K1AQ99755 562 aa11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 HAPLN2Q9GZV7 340 aa11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 NLE1Q9NVX2 485 aaPredicted RBP11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 FKBP14Q9NWM8 211 aa11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 A0A1W2PQ09 198 aa11.96□□□□□ -0.5
CSPG4P13-202ENST00000567704 ELOA3DA6NLF2 546 aaPredicted RBP11.96□□□□□ -0.5
CSPG4P13-202ENST00000567704 PSMD9O00233 223 aa11.96□□□□□ -0.5
CSPG4P13-202ENST00000567704 PPP6CO00743 305 aa11.96□□□□□ -0.5
CSPG4P13-202ENST00000567704 GRM6O15303 877 aa11.96□□□□□ -0.5
CSPG4P13-202ENST00000567704 FLRT2O43155 660 aa11.96□□□□□ -0.5
CSPG4P13-202ENST00000567704 PDYNP01213 254 aa11.96□□□□□ -0.5
CSPG4P13-202ENST00000567704 C21orf33P30042 268 aaPredicted RBP11.96□□□□□ -0.5
CSPG4P13-202ENST00000567704 POU4F3Q15319 338 aa11.96□□□□□ -0.5
CSPG4P13-202ENST00000567704 ELOA3BQ3SY89 546 aa11.96□□□□□ -0.5
CSPG4P13-202ENST00000567704 NHSL2Q5HYW2 709 aa11.96□□□□□ -0.5
CSPG4P13-202ENST00000567704 VARS2Q5ST30 1063 aaKnown RBP11.96□□□□□ -0.5
CSPG4P13-202ENST00000567704 ATAD3CQ5T2N8 411 aa11.96□□□□□ -0.5
CSPG4P13-202ENST00000567704 FOXRED2Q8IWF2 684 aa11.96□□□□□ -0.5
CSPG4P13-202ENST00000567704 TMEM130Q8N3G9 435 aa11.96□□□□□ -0.5
CSPG4P13-202ENST00000567704 FAM109AQ8N4B1 249 aa11.96□□□□□ -0.5
CSPG4P13-202ENST00000567704 ELOA3Q8NG57 546 aa11.96□□□□□ -0.5
CSPG4P13-202ENST00000567704 VAPAQ9P0L0 249 aa11.96□□□□□ -0.5
CSPG4P13-202ENST00000567704 PCDHGB1Q9Y5G3 927 aa11.96□□□□□ -0.5
CSPG4P13-202ENST00000567704 C13orf42A0A1B0GVH6 325 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 SMN1Q16637 294 aaKnown RBP11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 NRARPQ7Z6K4 114 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 CADM3Q8N126 398 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 ANKLE1Q8NAG6 615 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 S100A16Q96FQ6 103 aaKnown RBP11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 IMP4Q96G21 291 aaKnown RBP11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 COQ10AQ96MF6 247 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 SECISBP2Q96T21 854 aaKnown RBP11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 B3GNT4Q9C0J1 378 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 SMOC2Q9H3U7 446 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 ADAP2Q9NPF8 381 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 FNIP2Q9P278 1114 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 RGPD5Q99666 1765 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 A0A1B0GTW7 788 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 GMFGO60234 142 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 PQBP1O60828 265 aaKnown RBP11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 BEST1O76090 585 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 DRD5P21918 477 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 CNR2P34972 360 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 ARHGDIBP52566 201 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 MAD2L1BPQ15013 274 aaPredicted RBP11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 XKR4Q5GH76 650 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 GPALPP1Q8IXQ4 340 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 OR10H5Q8NGA6 315 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 GTF2H4Q92759 462 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 SPACA7Q96KW9 195 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 LRR1Q96L50 414 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 CDADC1Q9BWV3 514 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 RANGRFQ9HD47 186 aaPredicted RBP11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 GKN1Q9NS71 199 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 MRPL15Q9P015 296 aaKnown RBP11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 FBXL3Q9UKT7 428 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 PCDHGB7Q9Y5F8 929 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 KCPQ6ZWJ8 1503 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 POP4O95707 220 aaKnown RBP11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 TNFRSF1BP20333 461 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 FDXRP22570 491 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 POLR2IP36954 125 aaKnown RBP11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 KCNQ1P51787 676 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 AFF1P51825 1210 aaKnown RBP11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 ERVPABLB-1P60509 514 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 GSTM4Q03013 218 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 ZNF155Q12901 538 aaPredicted RBP11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 APOFQ13790 326 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 CCDC58Q4VC31 144 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 CDKL4Q5MAI5 379 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 MBOAT1Q6ZNC8 495 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 POGLUT1Q8NBL1 392 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 PTERQ96BW5 349 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 CDH10Q9Y6N8 788 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 EPOP01588 193 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 APOC1P02654 83 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 MT-ND5P03915 603 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 ARSAP15289 507 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 MAGEA6P43360 314 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 ST3GAL3Q11203 375 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 SERINC3Q13530 473 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 EIF5AL1Q6IS14 154 aaKnown RBP11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 TMC8Q8IU68 726 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 MZB1Q8WU39 189 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 TM9SF2Q99805 663 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 ZNF350Q9GZX5 532 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 ACOT13Q9NPJ3 140 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 CRTAC1Q9NQ79 661 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 DLGAP4Q9Y2H0 992 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 PLEKHA6Q9Y2H5 1048 aa11.95□□□□□ -0.5
CSPG4P13-202ENST00000567704 TEX13CA0A0J9YWL9 993 aa11.94□□□□□ -0.5
CSPG4P13-202ENST00000567704 ACOT8O14734 319 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms