RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 BRF2Q9HAW0 419 aa15.09■□□□□ 0.01
RAB40C-208ENST00000564703 P4HTMQ9NXG6 502 aa15.09■□□□□ 0.01
RAB40C-208ENST00000564703 NKIRAS1Q9NYS0 192 aa15.09■□□□□ 0.01
RAB40C-208ENST00000564703 SLC12A4Q9UP95 1085 aa15.09■□□□□ 0.01
RAB40C-208ENST00000564703 A0A1B0GTL3 188 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 ARHGAP10A1A4S6 786 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 WDR91A4D1P6 747 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 ARGFXA6NJG6 315 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 AGPSO00116 658 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 BIRC5O15392 142 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 NPHS1O60500 1241 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 DNAJB6O75190 326 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 ALOX12BO75342 701 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 JRKO75564 520 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 TBX6O95947 436 aaPredicted RBP15.08■□□□□ 0
RAB40C-208ENST00000564703 CHEK2O96017 543 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 FHP07954 510 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 CYC1P08574 325 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 HSD3B1P14060 373 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 HIST1H1TP22492 207 aaPredicted RBP15.08■□□□□ 0
RAB40C-208ENST00000564703 HSD3B2P26439 372 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 TLX1P31314 330 aaPredicted RBP15.08■□□□□ 0
RAB40C-208ENST00000564703 SERPINB5P36952 375 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 ETV4P43268 484 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 SERPINB4P48594 390 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 SLAMF1Q13291 335 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 CYP20A1Q6UW02 462 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 PAGE2Q7Z2X7 111 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 CA13Q8N1Q1 262 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 GBP7Q8N8V2 638 aaPredicted RBP15.08■□□□□ 0
RAB40C-208ENST00000564703 ANKRD42Q8N9B4 389 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 AGAP11Q8TF27 550 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 SHCBP1LQ9BZQ2 653 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 ING2Q9H160 280 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 FARSBQ9NSD9 589 aaKnown RBP15.08■□□□□ 0
RAB40C-208ENST00000564703 MS4A12Q9NXJ0 267 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 C19orf25Q9UFG5 118 aaPredicted RBP15.08■□□□□ 0
RAB40C-208ENST00000564703 ZNF225Q9UK10 706 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 G3BP2Q9UN86 482 aaKnown RBP15.08■□□□□ 0
RAB40C-208ENST00000564703 TIMM22Q9Y584 194 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 KCNMB2Q9Y691 235 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 SCN2AQ99250 2005 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 PKD1L2Q7Z442 2459 aa15.08■□□□□ 0
RAB40C-208ENST00000564703 C4orf51C9J302 202 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 ERVH48-1M5A8F1 160 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 RTCAO00442 366 aaKnown RBP15.07■□□□□ 0
RAB40C-208ENST00000564703 UBFD1O14562 309 aaKnown RBP15.07■□□□□ 0
RAB40C-208ENST00000564703 PRMT3O60678 531 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 CDC123O75794 336 aaPredicted RBP15.07■□□□□ 0
RAB40C-208ENST00000564703 SEMA3DO95025 777 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 C8orf89P0DMQ9 161 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 SFTPCP11686 197 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 ACPPP15309 386 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 CERS1P27544 350 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 LIM2P55344 173 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 RAB38P57729 211 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 ACTN3Q08043 901 aaPredicted RBP15.07■□□□□ 0
RAB40C-208ENST00000564703 ATP1A4Q13733 1029 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 NSDHLQ15738 373 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 PPP1R32Q7Z5V6 425 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 UBE3DQ7Z6J8 389 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 MRGPREQ86SM8 312 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 CLEC1AQ8NC01 280 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 PLPP5Q8NEB5 264 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 PTCHD1Q96NR3 888 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 RBCK1Q9BYM8 510 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 VN1R1Q9GZP7 353 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 LYRM4Q9HD34 91 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 ATP13A2Q9NQ11 1180 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 VPS29Q9UBQ0 182 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 DAPP1Q9UN19 280 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 HS3ST3B1Q9Y662 390 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 WDFY3Q8IZQ1 3526 aa15.07■□□□□ 0
RAB40C-208ENST00000564703 TMEM120BA0PK00 339 aa15.06■□□□□ 0
RAB40C-208ENST00000564703 FAM227AF5H4B4 570 aa15.06■□□□□ 0
RAB40C-208ENST00000564703 PLPP1O14494 284 aa15.06■□□□□ 0
RAB40C-208ENST00000564703 UROSP10746 265 aa15.06■□□□□ 0
RAB40C-208ENST00000564703 CPN2P22792 545 aa15.06■□□□□ 0
RAB40C-208ENST00000564703 CCL11P51671 97 aa15.06■□□□□ 0
RAB40C-208ENST00000564703 SLC18A1P54219 525 aa15.06■□□□□ 0
RAB40C-208ENST00000564703 GALNT1Q10472 559 aaPredicted RBP15.06■□□□□ 0
RAB40C-208ENST00000564703 CSTF3Q12996 717 aaKnown RBP15.06■□□□□ 0
RAB40C-208ENST00000564703 IMPG1Q17R60 797 aa15.06■□□□□ 0
RAB40C-208ENST00000564703 ARL13AQ5H913 290 aaPredicted RBP15.06■□□□□ 0
RAB40C-208ENST00000564703 IRAK1BP1Q5VVH5 260 aa15.06■□□□□ 0
RAB40C-208ENST00000564703 KIRREL2Q6UWL6 708 aa15.06■□□□□ 0
RAB40C-208ENST00000564703 CUZD1Q86UP6 607 aa15.06■□□□□ 0
RAB40C-208ENST00000564703 NUDT13Q86X67 352 aa15.06■□□□□ 0
RAB40C-208ENST00000564703 APLFQ8IW19 511 aaPredicted RBP15.06■□□□□ 0
RAB40C-208ENST00000564703 C7orf57Q8NEG2 295 aa15.06■□□□□ 0
RAB40C-208ENST00000564703 TLCD1Q96CP7 247 aa15.06■□□□□ 0
RAB40C-208ENST00000564703 UBL7Q96S82 380 aaPredicted RBP15.06■□□□□ 0
RAB40C-208ENST00000564703 DDX31Q9H8H2 851 aaKnown RBP15.06■□□□□ 0
RAB40C-208ENST00000564703 WDR41Q9HAD4 459 aa15.06■□□□□ 0
RAB40C-208ENST00000564703 PHF11Q9UIL8 331 aa15.06■□□□□ 0
RAB40C-208ENST00000564703 FBXW2Q9UKT8 454 aa15.06■□□□□ 0
RAB40C-208ENST00000564703 ASPMQ8IZT6 3477 aa15.06■□□□□ 0
RAB40C-208ENST00000564703 NSG1A0A0A6YYJ2 146 aa15.05■□□□□ -0
RAB40C-208ENST00000564703 BLACEA4D250 179 aa15.05■□□□□ -0
RAB40C-208ENST00000564703 MKRN2OSH3BPM6 223 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms