RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 PCSK2P16519 638 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 SMSP52788 366 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 TSPAN5P62079 268 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 LRIT3Q3SXY7 679 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 GARNL3Q5VVW2 1013 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 XKRXQ6PP77 449 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 AGTRAPQ6RW13 159 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 GDPD3Q7L5L3 318 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 IQCF1Q8N6M8 205 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 ARL14EPQ8N8R7 260 aaPredicted RBP12.13□□□□□ -0.47
COMMD4-209ENST00000564068 ADAMTS15Q8TE58 950 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 AP2M1Q96CW1 435 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 FYTTD1Q96QD9 318 aaKnown RBP12.13□□□□□ -0.47
COMMD4-209ENST00000564068 FUZQ9BT04 418 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 TTLL2Q9BWV7 592 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 GPN1Q9HCN4 374 aaPredicted RBP12.13□□□□□ -0.47
COMMD4-209ENST00000564068 MGAT4AQ9UM21 535 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 OARD1Q9Y530 152 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 URB1O60287 2271 aaKnown RBP12.13□□□□□ -0.47
COMMD4-209ENST00000564068 SMCHD1A6NHR9 2005 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 A0A1B0GTL3 188 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 L7N2F9 121 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 ASGR1P07306 291 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 GGT2P36268 569 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 PTPRRQ15256 657 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 TBCEQ15813 527 aaPredicted RBP12.13□□□□□ -0.47
COMMD4-209ENST00000564068 TATDN3Q17R31 274 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 ZNF630Q2M218 657 aaPredicted RBP12.13□□□□□ -0.47
COMMD4-209ENST00000564068 BCL2L15Q5TBC7 163 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 ADNP2Q6IQ32 1131 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 VASH1Q7L8A9 365 aaPredicted RBP12.13□□□□□ -0.47
COMMD4-209ENST00000564068 OR8J1Q8NGP2 316 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 HTATIP2Q9BUP3 242 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 TNFRSF10DQ9UBN6 386 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 ADAMTS5Q9UNA0 930 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 A0A1B0GVC2 190 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 A6NIN4 97 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 E2F3O00716 465 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 JRKO75564 520 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 HPGDP15428 266 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 CCR4P51679 360 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 AP1S2P56377 157 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 KCNC4Q03721 635 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 BTG3Q14201 252 aaPredicted RBP12.12□□□□□ -0.47
COMMD4-209ENST00000564068 GTF2IRD2BQ6EKJ0 949 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 GTF2IRD2Q86UP8 949 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 NLGN4XQ8N0W4 816 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 FAM98AQ8NCA5 519 aaKnown RBP12.12□□□□□ -0.47
COMMD4-209ENST00000564068 R3HDMLQ9H3Y0 253 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 NANSQ9NR45 359 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 TMEM39AQ9NV64 488 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 KIAA1522Q9P206 1035 aaPredicted RBP12.12□□□□□ -0.47
COMMD4-209ENST00000564068 CFAP97Q9P2B7 532 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 MLXQ9UH92 298 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 FXYD6-FXYD2A0A087WZ82 144 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 METTL15A6NJ78 407 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 TEX28O15482 410 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 PCDHGA12O60330 932 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 GPR32O75388 356 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 ANXA3P12429 323 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 SDC1P18827 310 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 OMPP47874 163 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 SLC35A2P78381 396 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 PRKCDQ05655 676 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 UGT3A2Q3SY77 523 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 AGMOQ6ZNB7 445 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 SLC24A5Q71RS6 500 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 RD3Q7Z3Z2 195 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 LAX1Q8IWV1 398 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 NXPE1Q8N323 547 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 RNF175Q8N4F7 328 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 SNX33Q8WV41 574 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 HYLS1Q96M11 299 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 CSF3RQ99062 836 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 FXYD6Q9H0Q3 95 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 ZNF385DQ9H6B1 395 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 AKAP7Q9P0M2 348 aaPredicted RBP12.12□□□□□ -0.47
COMMD4-209ENST00000564068 IRAK3Q9Y616 596 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 DDX60LQ5H9U9 1706 aaKnown RBP12.12□□□□□ -0.47
COMMD4-209ENST00000564068 CD8B2A6NJW9 211 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 SLC38A8A6NNN8 435 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 ANKRD28O15084 1053 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 CAPN5O15484 640 aaPredicted RBP12.12□□□□□ -0.47
COMMD4-209ENST00000564068 LYRM1O43325 122 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 HCN1O60741 890 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 SNAI1O95863 264 aaPredicted RBP12.12□□□□□ -0.47
COMMD4-209ENST00000564068 SRPRAP08240 638 aaKnown RBP12.12□□□□□ -0.47
COMMD4-209ENST00000564068 NUDT7P0C024 238 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 ADORA3P0DMS8 318 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 CD8BP10966 210 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 PTGES3Q15185 160 aaKnown RBP12.12□□□□□ -0.47
COMMD4-209ENST00000564068 REEP3Q6NUK4 255 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 ZNF767PQ75MW2 155 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 ZNF467Q7Z7K2 595 aaPredicted RBP12.12□□□□□ -0.47
COMMD4-209ENST00000564068 SCD5Q86SK9 330 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 SLC35B4Q969S0 331 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 COQ8BQ96D53 544 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 OR5M11Q96RB7 305 aa12.12□□□□□ -0.47
COMMD4-209ENST00000564068 WRAP53Q9BUR4 548 aaKnown RBP12.12□□□□□ -0.47
COMMD4-209ENST00000564068 MAB21L2Q9Y586 359 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms