RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 ONECUT3O60422 494 aaPredicted RBP11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 ACSM4P0C7M7 580 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 ACPPP15309 386 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 HOXB9P17482 250 aaPredicted RBP11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 HLA-DPA1P20036 260 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 NUP62P37198 522 aaPredicted RBP11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 C1DQ13901 141 aaKnown RBP11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 LEXMQ3ZCV2 418 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 LGALSLQ3ZCW2 172 aaPredicted RBP11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 AFMIDQ63HM1 303 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 NOTUMQ6P988 496 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 SBSNQ6UWP8 590 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 APOLD1Q96LR9 279 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 KCTD7Q96MP8 289 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 TMEM43Q9BTV4 400 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 MND1Q9BWT6 205 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 ZNF408Q9H9D4 720 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 SH3BP4Q9P0V3 963 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 PIN4Q9Y237 131 aaKnown RBP11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 SPIN1Q9Y657 262 aaPredicted RBP11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 SH3D21A4FU49 640 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 TEX46H3BTG2 121 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 CASKO14936 926 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 NCR1O76036 304 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 SOX14O95416 240 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 HLA-EP13747 358 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 ITGALP20701 1170 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 HOXC13P31276 330 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 HTR7P34969 479 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 PXNP49023 591 aaPredicted RBP11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 ZNF273Q14593 569 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 PTPRRQ15256 657 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 SF3A2Q15428 464 aaKnown RBP11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 CRTC2Q53ET0 693 aaPredicted RBP11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 AFTPHQ6ULP2 937 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 RTL4Q6ZR62 310 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 CIR1Q86X95 450 aaPredicted RBP11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 TAGAPQ8N103 731 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 SRFBP1Q8NEF9 429 aaKnown RBP11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 AP3S1Q92572 193 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 KIAA1143Q96AT1 154 aaPredicted RBP11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 B3GALT6Q96L58 329 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 DOHHQ9BU89 302 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 SLAMF7Q9NQ25 335 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 SLC35C2Q9NQQ7 365 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 FKBPLQ9UIM3 349 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 FZD4Q9ULV1 537 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 PPIEQ9UNP9 301 aaKnown RBP11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 PCDHGB7Q9Y5F8 929 aa11.85□□□□□ -0.51
SCAMP2-204ENST00000563829 FAM227AF5H4B4 570 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 CBX4O00257 560 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 PITPNM1O00562 1244 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 PDYNP01213 254 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 SDC1P18827 310 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 STOMP27105 288 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 MC4RP32245 332 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 AKR1D1P51857 326 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 ERVK-21P61565 698 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 GNA13Q14344 377 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 ZNF235Q14590 738 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 PCBP1Q15365 356 aaKnown RBP eCLIP11.84□□□□□ -0.516e-9■■■■■ 51
SCAMP2-204ENST00000563829 BICRALQ6AI39 1079 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 MBOAT1Q6ZNC8 495 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 TRIM46Q7Z4K8 759 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 STK40Q8N2I9 435 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 LINC01465Q8N7H1 131 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 AQP11Q8NBQ7 271 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 SELENOMQ8WWX9 145 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 SMARCD1Q96GM5 515 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 ZFP42Q96MM3 310 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 USB1Q9BQ65 265 aaKnown RBP11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 FOLH1BQ9HBA9 442 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 PRM3Q9NNZ6 103 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 GMEB2Q9UKD1 530 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 ACTL7AQ9Y615 435 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 TTC3P53804 2025 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 LOC105369274A0A096LPK9 316 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 SOCS7O14512 581 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 APOL3O95236 402 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 IGFBP1P08833 259 aaPredicted RBP11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 ANXA3P12429 323 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 ERVFC1P60507 584 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 PCDH1Q08174 1060 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 CRYZQ08257 329 aaKnown RBP11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 DUOXA1Q1HG43 343 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 OR4N4Q8N0Y3 316 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 MS4A15Q8N5U1 240 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 SLAIN1Q8ND83 568 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 UCN3Q969E3 161 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 CREB3L1Q96BA8 519 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 SORBS1Q9BX66 1292 aaKnown RBP11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 GSX2Q9BZM3 304 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 POLR1EQ9GZS1 481 aaKnown RBP11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 TPT1P8Q9HAU6 139 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 NLE1Q9NVX2 485 aaPredicted RBP11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 PADI2Q9Y2J8 665 aa11.84□□□□□ -0.51
SCAMP2-204ENST00000563829 ARPC4-TTLL3A0A0A6YYG9 625 aa11.83□□□□□ -0.51
SCAMP2-204ENST00000563829 LGI1O95970 557 aa11.83□□□□□ -0.51
SCAMP2-204ENST00000563829 GPX2P18283 190 aa11.83□□□□□ -0.51
SCAMP2-204ENST00000563829 ALDH9A1P49189 494 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms