RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 TMEM52Q8NDY8 209 aa26.57■■□□□ 1.84
NME3-203ENST00000563367 CPT1CQ8TCG5 803 aa26.57■■□□□ 1.84
NME3-203ENST00000563367 CDK15Q96Q40 435 aa26.57■■□□□ 1.84
NME3-203ENST00000563367 CCDC77Q9BR77 488 aa26.57■■□□□ 1.84
NME3-203ENST00000563367 ZBTB26Q9HCK0 441 aa26.57■■□□□ 1.84
NME3-203ENST00000563367 PRM3Q9NNZ6 103 aa26.57■■□□□ 1.84
NME3-203ENST00000563367 PRDM9Q9NQV7 894 aa26.57■■□□□ 1.84
NME3-203ENST00000563367 IGKV3D-11A0A0A0MRZ8 115 aa26.56■■□□□ 1.84
NME3-203ENST00000563367 FOXO6A8MYZ6 492 aa26.56■■□□□ 1.84
NME3-203ENST00000563367 RTCAO00442 366 aaKnown RBP26.56■■□□□ 1.84
NME3-203ENST00000563367 UGDHO60701 494 aa26.56■■□□□ 1.84
NME3-203ENST00000563367 SERPINB1P30740 379 aa26.56■■□□□ 1.84
NME3-203ENST00000563367 LIM2P55344 173 aa26.56■■□□□ 1.84
NME3-203ENST00000563367 RAB38P57729 211 aa26.56■■□□□ 1.84
NME3-203ENST00000563367 KCNC4Q03721 635 aa26.56■■□□□ 1.84
NME3-203ENST00000563367 TGM3Q08188 693 aa26.56■■□□□ 1.84
NME3-203ENST00000563367 CPSF6Q16630 551 aaKnown RBP eCLIP26.56■■□□□ 1.84
NME3-203ENST00000563367 OR52B6Q8NGF0 335 aa26.56■■□□□ 1.84
NME3-203ENST00000563367 PPP4R1Q8TF05 950 aa26.56■■□□□ 1.84
NME3-203ENST00000563367 CMTM7Q96FZ5 175 aa26.56■■□□□ 1.84
NME3-203ENST00000563367 KCNC2Q96PR1 638 aa26.56■■□□□ 1.84
NME3-203ENST00000563367 MTERF1Q99551 399 aaKnown RBP26.56■■□□□ 1.84
NME3-203ENST00000563367 OR51B5Q9H339 312 aa26.56■■□□□ 1.84
NME3-203ENST00000563367 EPS8L2Q9H6S3 715 aa26.56■■□□□ 1.84
NME3-203ENST00000563367 COPS7BQ9H9Q2 264 aaPredicted RBP26.56■■□□□ 1.84
NME3-203ENST00000563367 TSC22D4Q9Y3Q8 395 aa26.56■■□□□ 1.84
NME3-203ENST00000563367 PCDHGA11Q9Y5H2 935 aa26.56■■□□□ 1.84
NME3-203ENST00000563367 MYO18BQ8IUG5 2567 aa26.56■■□□□ 1.84
NME3-203ENST00000563367 A8MT66 165 aa26.55■■□□□ 1.84
NME3-203ENST00000563367 H0YIV9 168 aa26.55■■□□□ 1.84
NME3-203ENST00000563367 SAP18O00422 153 aaKnown RBP26.55■■□□□ 1.84
NME3-203ENST00000563367 ZIC2O95409 532 aaPredicted RBP26.55■■□□□ 1.84
NME3-203ENST00000563367 INPP5JQ15735 1006 aaPredicted RBP26.55■■□□□ 1.84
NME3-203ENST00000563367 TMEM35AQ53FP2 167 aa26.55■■□□□ 1.84
NME3-203ENST00000563367 KHDRBS2Q5VWX1 349 aaKnown RBP26.55■■□□□ 1.84
NME3-203ENST00000563367 RPS27LQ71UM5 84 aaKnown RBP26.55■■□□□ 1.84
NME3-203ENST00000563367 FAM47BQ8NA70 645 aa26.55■■□□□ 1.84
NME3-203ENST00000563367 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP26.55■■□□□ 1.843e-6■■■■□ 24.4
NME3-203ENST00000563367 CSF3RQ99062 836 aa26.55■■□□□ 1.84
NME3-203ENST00000563367 LPAR4Q99677 370 aa26.55■■□□□ 1.84
NME3-203ENST00000563367 ILKAPQ9H0C8 392 aaPredicted RBP26.55■■□□□ 1.84
NME3-203ENST00000563367 DMRT3Q9NQL9 472 aa26.55■■□□□ 1.84
NME3-203ENST00000563367 PLA2G3Q9NZ20 509 aa26.55■■□□□ 1.84
NME3-203ENST00000563367 KCMF1Q9P0J7 381 aa26.55■■□□□ 1.84
NME3-203ENST00000563367 ADGRE2Q9UHX3 823 aa26.55■■□□□ 1.84
NME3-203ENST00000563367 DAPP1Q9UN19 280 aa26.55■■□□□ 1.84
NME3-203ENST00000563367 A0A1W2PPM1 405 aa26.54■■□□□ 1.84
NME3-203ENST00000563367 TCRBV16S1A1N1A0A5B0 115 aa26.54■■□□□ 1.84
NME3-203ENST00000563367 CLDN9O95484 217 aa26.54■■□□□ 1.84
NME3-203ENST00000563367 PYGBP11216 843 aa26.54■■□□□ 1.84
NME3-203ENST00000563367 ATP5A1P25705 553 aaKnown RBP26.54■■□□□ 1.84
NME3-203ENST00000563367 PIK3CBP42338 1070 aa26.54■■□□□ 1.84
NME3-203ENST00000563367 VSNL1P62760 191 aa26.54■■□□□ 1.84
NME3-203ENST00000563367 AP2B1P63010 937 aa26.54■■□□□ 1.84
NME3-203ENST00000563367 DEPDC1Q5TB30 811 aa26.54■■□□□ 1.84
NME3-203ENST00000563367 CHSY3Q70JA7 882 aa26.54■■□□□ 1.84
NME3-203ENST00000563367 CYP4X1Q8N118 509 aa26.54■■□□□ 1.84
NME3-203ENST00000563367 ACOT4Q8N9L9 421 aa26.54■■□□□ 1.84
NME3-203ENST00000563367 CATSPER1Q8NEC5 780 aa26.54■■□□□ 1.84
NME3-203ENST00000563367 SRFBP1Q8NEF9 429 aaKnown RBP26.54■■□□□ 1.84
NME3-203ENST00000563367 DNAJB14Q8TBM8 379 aa26.54■■□□□ 1.84
NME3-203ENST00000563367 M1APQ8TC57 530 aa26.54■■□□□ 1.84
NME3-203ENST00000563367 ACMSDQ8TDX5 336 aa26.54■■□□□ 1.84
NME3-203ENST00000563367 TBCDQ9BTW9 1192 aa26.54■■□□□ 1.84
NME3-203ENST00000563367 SORBS1Q9BX66 1292 aaKnown RBP26.54■■□□□ 1.84
NME3-203ENST00000563367 MMACHCQ9Y4U1 282 aa26.54■■□□□ 1.84
NME3-203ENST00000563367 CLDN16Q9Y5I7 305 aa26.54■■□□□ 1.84
NME3-203ENST00000563367 TGFBR3LH3BV60 316 aa26.53■■□□□ 1.84
NME3-203ENST00000563367 CYR61O00622 381 aa26.53■■□□□ 1.84
NME3-203ENST00000563367 RPS17P08708 135 aaKnown RBP26.53■■□□□ 1.84
NME3-203ENST00000563367 SLCO1A2P46721 670 aa26.53■■□□□ 1.84
NME3-203ENST00000563367 CCNG1P51959 295 aa26.53■■□□□ 1.84
NME3-203ENST00000563367 SLC26A5P58743 744 aa26.53■■□□□ 1.84
NME3-203ENST00000563367 RPS13P62277 151 aaKnown RBP26.53■■□□□ 1.84
NME3-203ENST00000563367 ZRSR2Q15696 482 aaKnown RBP26.53■■□□□ 1.84
NME3-203ENST00000563367 EXT1Q16394 746 aa26.53■■□□□ 1.84
NME3-203ENST00000563367 LCA5Q86VQ0 697 aa26.53■■□□□ 1.84
NME3-203ENST00000563367 SCUBE1Q8IWY4 988 aa26.53■■□□□ 1.84
NME3-203ENST00000563367 WDR20Q8TBZ3 569 aa26.53■■□□□ 1.84
NME3-203ENST00000563367 ATP6V1E2Q96A05 226 aa26.53■■□□□ 1.84
NME3-203ENST00000563367 CNDP1Q96KN2 507 aa26.53■■□□□ 1.84
NME3-203ENST00000563367 MAGEB10Q96LZ2 347 aaPredicted RBP26.53■■□□□ 1.84
NME3-203ENST00000563367 NTMT1Q9BV86 223 aa26.53■■□□□ 1.84
NME3-203ENST00000563367 CLMPQ9H6B4 373 aa26.53■■□□□ 1.84
NME3-203ENST00000563367 MMP25Q9NPA2 562 aa26.53■■□□□ 1.84
NME3-203ENST00000563367 SEMA4BQ9NPR2 832 aaPredicted RBP26.53■■□□□ 1.84
NME3-203ENST00000563367 A0A1B0GTL3 188 aa26.52■■□□□ 1.84
NME3-203ENST00000563367 A8MUI8 341 aa26.52■■□□□ 1.84
NME3-203ENST00000563367 NEK2P51955 445 aa26.52■■□□□ 1.84
NME3-203ENST00000563367 TRAF3Q13114 568 aa26.52■■□□□ 1.84
NME3-203ENST00000563367 H3F3CQ6NXT2 135 aa26.52■■□□□ 1.84
NME3-203ENST00000563367 RP1L1Q8IWN7 2480 aaPredicted RBP26.52■■□□□ 1.84
NME3-203ENST00000563367 IQCKQ8N0W5 287 aa26.52■■□□□ 1.84
NME3-203ENST00000563367 CISD2Q8N5K1 135 aaKnown RBP26.52■■□□□ 1.84
NME3-203ENST00000563367 ZNF483Q8TF39 744 aaPredicted RBP26.52■■□□□ 1.84
NME3-203ENST00000563367 REPS1Q96D71 796 aa26.52■■□□□ 1.84
NME3-203ENST00000563367 C19orf60Q96EN9 201 aa26.52■■□□□ 1.84
NME3-203ENST00000563367 MAPKAP1Q9BPZ7 522 aa26.52■■□□□ 1.84
NME3-203ENST00000563367 ROGDIQ9GZN7 287 aa26.52■■□□□ 1.84
NME3-203ENST00000563367 PRTFDC1Q9NRG1 225 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms