RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 CCL27Q9Y4X3 112 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 HS3ST3B1Q9Y662 390 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 TMEM120BA0PK00 339 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 GOLGA6L10A6NI86 522 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 IDSB3KWA1 339 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 CYR61O00622 381 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 SNUPNO95149 360 aaKnown RBP12.66□□□□□ -0.38
CDH1-204ENST00000562118 PDYNP01213 254 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 FHP07954 510 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 RNH1P13489 461 aaKnown RBP12.66□□□□□ -0.38
CDH1-204ENST00000562118 PRPH2P23942 346 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 XCR1P46094 333 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 HTR6P50406 440 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 SOX8P57073 446 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 RAB38P57729 211 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 BTN3A2P78410 334 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 OCA2Q04671 838 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 TGM3Q08188 693 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 IFT88Q13099 833 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 TUBB8Q3ZCM7 444 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 TCHHL1Q5QJ38 904 aaPredicted RBP12.66□□□□□ -0.38
CDH1-204ENST00000562118 ATP1A1-AS1Q5TC04 95 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 FAM219BQ5XKK7 198 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 KANK2Q63ZY3 851 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 PCSK4Q6UW60 755 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 QSOX2Q6ZRP7 698 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 MYLK4Q86YV6 388 aaPredicted RBP12.66□□□□□ -0.38
CDH1-204ENST00000562118 SCUBE1Q8IWY4 988 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 METTL4Q8N3J2 472 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 CCNYL1Q8N7R7 359 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 GBP7Q8N8V2 638 aaPredicted RBP12.66□□□□□ -0.38
CDH1-204ENST00000562118 ACOT4Q8N9L9 421 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 PLPP5Q8NEB5 264 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 RGMAQ96B86 450 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 TBC1D20Q96BZ9 403 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 WBP1Q96G27 269 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 KCNA7Q96RP8 456 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 VN1R1Q9GZP7 353 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 CENPHQ9H3R5 247 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 ELOVL6Q9H5J4 265 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 MID1IP1Q9NPA3 183 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 HCN3Q9P1Z3 774 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 POLHQ9Y253 713 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 KCNMB2Q9Y691 235 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 DOCK10Q96BY6 2186 aa12.66□□□□□ -0.38
CDH1-204ENST00000562118 ZNF860A6NHJ4 632 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 FFAR3O14843 346 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 GPR42O15529 346 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 JRKO75564 520 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 CEACAM4O75871 244 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 KRT6AP02538 564 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 KRT6BP04259 564 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 CHRNGP07510 517 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 UROSP10746 265 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 CERS1P27544 350 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 KRT6CP48668 564 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 PLA2G16P53816 162 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 LIM2P55344 173 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 RHDQ02161 417 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 ERV3-1Q14264 604 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 ABRAXAS2Q15018 415 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 LINC00303Q3SY05 128 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 ARL13AQ5H913 290 aaPredicted RBP12.65□□□□□ -0.38
CDH1-204ENST00000562118 CFAP157Q5JU67 520 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 OR4C11Q6IEV9 310 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 GALNT18Q6P9A2 607 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 KIRREL2Q6UWL6 708 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 CUZD1Q86UP6 607 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 RAB43Q86YS6 212 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 METTL6Q8TCB7 284 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 CCT6BQ92526 530 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 METTL2AQ96IZ6 378 aaKnown RBP12.65□□□□□ -0.38
CDH1-204ENST00000562118 FAR2Q96K12 515 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 CRB3Q9BUF7 120 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 ACPTQ9BZG2 426 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 SOX17Q9H6I2 414 aaPredicted RBP12.65□□□□□ -0.38
CDH1-204ENST00000562118 PRDM9Q9NQV7 894 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 C3orf18Q9UK00 162 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 ASB4Q9Y574 426 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 CPAMD8Q8IZJ3 1885 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 CFAP46Q8IYW2 2715 aa12.65□□□□□ -0.38
CDH1-204ENST00000562118 FAM208BQ5VWN6 2430 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 PIEZO2Q9H5I5 2752 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 TLN1Q9Y490 2541 aaKnown RBP12.64□□□□□ -0.39
CDH1-204ENST00000562118 SCN2AQ99250 2005 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 UQCRHLA0A096LP55 91 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 BLACEA4D250 179 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 HMGB1P1B2RPK0 211 aaPredicted RBP12.64□□□□□ -0.39
CDH1-204ENST00000562118 TMEM114B3SHH9 223 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 ERVH48-1M5A8F1 160 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 RTCAO00442 366 aaKnown RBP12.64□□□□□ -0.39
CDH1-204ENST00000562118 B3GALT2O43825 422 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 ULK1O75385 1050 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 EEDO75530 441 aaKnown RBP12.64□□□□□ -0.39
CDH1-204ENST00000562118 SERPINE1P05121 402 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 UQCRHP07919 91 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 JAK1P23458 1154 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 GRK2P25098 689 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 TPP2P29144 1249 aaPredicted RBP12.64□□□□□ -0.39
CDH1-204ENST00000562118 OLR1P78380 273 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms