RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 RXRGP48443 463 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 PRIM2P49643 509 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 DAPP51397 102 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 PPP2CBP62714 309 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 PPP2CAP67775 309 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 EEF1A2Q05639 463 aaKnown RBP9.36□□□□□ -0.91
SMG1-205ENST00000561947 CD47Q08722 323 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 ELOAQ14241 798 aaKnown RBP9.36□□□□□ -0.91
SMG1-205ENST00000561947 HEPACAMQ14CZ8 416 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 SLC5A12Q1EHB4 618 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 ZNF630Q2M218 657 aaPredicted RBP9.36□□□□□ -0.91
SMG1-205ENST00000561947 UAP1L1Q3KQV9 507 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 KDM4DQ6B0I6 523 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 KCTD8Q6ZWB6 473 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 CCDC80Q76M96 950 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 ADCK2Q7Z695 626 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 CHDHQ8NE62 594 aaPredicted RBP9.36□□□□□ -0.91
SMG1-205ENST00000561947 PIK3C3Q8NEB9 887 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 OR52E1Q8NGJ3 308 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 SCARF2Q96GP6 870 aaPredicted RBP9.36□□□□□ -0.91
SMG1-205ENST00000561947 EPS8L2Q9H6S3 715 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 POLR1BQ9H9Y6 1135 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 PDP1Q9P0J1 537 aaPredicted RBP9.36□□□□□ -0.91
SMG1-205ENST00000561947 ADAM29Q9UKF5 820 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 SCML1Q9UN30 329 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 MAP4K5Q9Y4K4 846 aa9.36□□□□□ -0.91
SMG1-205ENST00000561947 RANBP2P49792 3224 aaKnown RBP9.35□□□□□ -0.91
SMG1-205ENST00000561947 OR52A4PA6NMU1 304 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 BCKDKO14874 412 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 PDPK1O15530 556 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 B4GAT1O43505 415 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 LCMT2O60294 686 aaKnown RBP9.35□□□□□ -0.91
SMG1-205ENST00000561947 CLEC3AO75596 197 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 ARAFP10398 606 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 DDX5P17844 614 aaKnown RBP9.35□□□□□ -0.91
SMG1-205ENST00000561947 EEF1B2P24534 225 aaKnown RBP9.35□□□□□ -0.91
SMG1-205ENST00000561947 RYKP34925 604 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 ISL1P61371 349 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 MEP1AQ16819 746 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 CTU2Q2VPK5 515 aaKnown RBP9.35□□□□□ -0.91
SMG1-205ENST00000561947 C6orf141Q5SZD1 244 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 EP400NLQ6ZTU2 488 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 UBE3DQ7Z6J8 389 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 GALNT5Q7Z7M9 940 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 PLD3Q8IV08 490 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 CREB3L4Q8TEY5 395 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 ASB12Q8WXK4 309 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 OR5P2Q8WZ92 322 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 TAMM41Q96BW9 452 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 EPYCQ99645 322 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 TMEM121BQ9BXQ6 578 aaPredicted RBP9.35□□□□□ -0.91
SMG1-205ENST00000561947 NLNQ9BYT8 704 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 ADNPQ9H2P0 1102 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 CXorf36Q9H7Y0 433 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 FGF22Q9HCT0 170 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 SLAMF7Q9NQ25 335 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 THUMPD1Q9NXG2 353 aaKnown RBP9.35□□□□□ -0.91
SMG1-205ENST00000561947 TRBC2A0A5B9 178 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 ANHXE9PGG2 379 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 UGT2B11O75310 529 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 CPNE6O95741 557 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 C9P02748 559 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 OPN1SWP03999 348 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 TTKP33981 857 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 POLR2IP36954 125 aaKnown RBP9.35□□□□□ -0.91
SMG1-205ENST00000561947 ALDH9A1P49189 494 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 KIAA1024LP59773 190 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 GABARAPL2P60520 117 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 CDK6Q00534 326 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 PMS2P3Q13401 168 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 TOP3AQ13472 1001 aaPredicted RBP9.35□□□□□ -0.91
SMG1-205ENST00000561947 RPE65Q16518 533 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 IFI44LQ53G44 452 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 BROXQ5VW32 411 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 CLVS1Q8IUQ0 354 aaPredicted RBP9.35□□□□□ -0.91
SMG1-205ENST00000561947 TTLQ8NG68 377 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 SPPL2AQ8TCT8 520 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 SIPA1Q96FS4 1042 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 ZNF764Q96H86 408 aaPredicted RBP9.35□□□□□ -0.91
SMG1-205ENST00000561947 OR2M4Q96R27 311 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 ABCG4Q9H172 646 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 RIBC2Q9H4K1 309 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 DDX31Q9H8H2 851 aaKnown RBP9.35□□□□□ -0.91
SMG1-205ENST00000561947 PRDM8Q9NQV8 689 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 ANGPT4Q9Y264 503 aa9.35□□□□□ -0.91
SMG1-205ENST00000561947 PRSS38A1L453 326 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 ZNF701M0R085 212 aaPredicted RBP9.34□□□□□ -0.91
SMG1-205ENST00000561947 PRICKLE3O43900 615 aaPredicted RBP9.34□□□□□ -0.91
SMG1-205ENST00000561947 TMPRSS11DO60235 418 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 JRKO75564 520 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 HOXC4P09017 264 aaPredicted RBP9.34□□□□□ -0.91
SMG1-205ENST00000561947 PCSK6P29122 969 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 RPS6KA3P51812 740 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 DSTNP60981 165 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 DYNC1I2Q13409 638 aaKnown RBP9.34□□□□□ -0.91
SMG1-205ENST00000561947 KEAP1Q14145 624 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 RAB39AQ14964 217 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 SKIV2LQ15477 1246 aaKnown RBP9.34□□□□□ -0.91
SMG1-205ENST00000561947 FAM180BQ6P0A1 224 aa9.34□□□□□ -0.91
SMG1-205ENST00000561947 FAHD1Q6P587 224 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms