RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 CCL7P80098 99 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 UGT8Q16880 541 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 FAM214AQ32MH5 1076 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 PROX2Q3B8N5 592 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 SNAP47Q5SQN1 464 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 C6orf10Q5SRN2 563 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 GARNL3Q5VVW2 1013 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 SLC2A7Q6PXP3 512 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 PRSS42Q7Z5A4 293 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 RETREG3Q86VR2 466 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 C10orf67Q8IYJ2 551 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 OR7A2PQ8NGA2 310 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 OR4D9Q8NGE8 314 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 OR8K5Q8NH50 307 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 IFI44Q8TCB0 444 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 RHBDD1Q8TEB9 315 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 KLHL6Q8WZ60 621 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 GTF2H4Q92759 462 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 TEFMQ96QE5 360 aaKnown RBP9.79□□□□□ -0.84
USP3-219ENST00000561326 SORBS1Q9BX66 1292 aaKnown RBP9.79□□□□□ -0.84
USP3-219ENST00000561326 ZNF717Q9BY31 904 aaPredicted RBP9.79□□□□□ -0.84
USP3-219ENST00000561326 LRRN3Q9H3W5 708 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 SMOC1Q9H4F8 434 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 ANKHQ9HCJ1 492 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 FAM60AQ9NP50 221 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 SPAG4Q9NPE6 437 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 IRAK4Q9NWZ3 460 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 SEMA5BQ9P283 1151 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 PHF11Q9UIL8 331 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 SERTAD3Q9UJW9 196 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 L3MBTL1Q9Y468 752 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 COL5A1P20908 1838 aaPredicted RBP9.79□□□□□ -0.84
USP3-219ENST00000561326 PCNX2A6NKB5 2137 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 A0A096LPI6 279 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 LY6G6EA0A0G2JKS1 128 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 LNP1A1A4G5 178 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 C1orf226A1L170 272 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 A8MU76 341 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 RNASET2O00584 256 aaKnown RBP9.78□□□□□ -0.84
USP3-219ENST00000561326 RFXANKO14593 260 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 NVLO15381 856 aaKnown RBP9.78□□□□□ -0.84
USP3-219ENST00000561326 FOXD2O60548 495 aaPredicted RBP9.78□□□□□ -0.84
USP3-219ENST00000561326 LRP3O75074 770 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 SCELO95171 688 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 STAMBPO95630 424 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 RPLP0P05388 317 aaKnown RBP9.78□□□□□ -0.84
USP3-219ENST00000561326 MSL3P1P0C860 447 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 LAMP1P11279 417 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 BUD31P41223 144 aaPredicted RBP9.78□□□□□ -0.84
USP3-219ENST00000561326 SEPHS1P49903 392 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 HNRNPFP52597 415 aaKnown RBP9.78□□□□□ -0.84
USP3-219ENST00000561326 EMP3P54852 163 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 PDE7AQ13946 482 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 GRM7Q14831 915 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 PAGE3Q5JUK9 113 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 SAMD4BQ5PRF9 694 aaKnown RBP9.78□□□□□ -0.84
USP3-219ENST00000561326 PERM1Q5SV97 790 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 OR4F3Q6IEY1 312 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 MRM1Q6IN84 353 aaKnown RBP9.78□□□□□ -0.84
USP3-219ENST00000561326 TCEAL6Q6IPX3 200 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 TMEM214Q6NUQ4 689 aaKnown RBP9.78□□□□□ -0.84
USP3-219ENST00000561326 DHDDSQ86SQ9 333 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 ULK2Q8IYT8 1036 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 GPR135Q8IZ08 494 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 FBXW8Q8N3Y1 598 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 D2HGDHQ8N465 521 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 ZCCHC10Q8TBK6 192 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 TCEAL3Q969E4 200 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 ZNF764Q96H86 408 aaPredicted RBP9.78□□□□□ -0.84
USP3-219ENST00000561326 CNDP2Q96KP4 475 aaKnown RBP9.78□□□□□ -0.84
USP3-219ENST00000561326 GBP5Q96PP8 586 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 PANX1Q96RD7 426 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 GFM1Q96RP9 751 aaKnown RBP9.78□□□□□ -0.84
USP3-219ENST00000561326 NPLQ9BXD5 320 aaPredicted RBP9.78□□□□□ -0.84
USP3-219ENST00000561326 COL25A1Q9BXS0 654 aaPredicted RBP9.78□□□□□ -0.84
USP3-219ENST00000561326 AICDAQ9GZX7 198 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 ZNF768Q9H5H4 540 aaKnown RBP9.78□□□□□ -0.84
USP3-219ENST00000561326 CLK4Q9HAZ1 481 aaKnown RBP9.78□□□□□ -0.84
USP3-219ENST00000561326 FANCEQ9HB96 536 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 LYRM4Q9HD34 91 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 LHX9Q9NQ69 397 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 TAS2R7Q9NYW3 318 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 EHD3Q9NZN3 535 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 FTSJ1Q9UET6 329 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 BTNL2Q9UIR0 455 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 MAN2B2Q9Y2E5 1009 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 ASB4Q9Y574 426 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 PCDHGA7Q9Y5G6 932 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.78□□□□□ -0.84
USP3-219ENST00000561326 U3KQA8 63 aa9.78□□□□□ -0.84
USP3-219ENST00000561326 VPS13AQ96RL7 3174 aa9.77□□□□□ -0.85
USP3-219ENST00000561326 HYKKA2RU49 373 aa9.77□□□□□ -0.85
USP3-219ENST00000561326 ASPDHA6ND91 283 aa9.77□□□□□ -0.85
USP3-219ENST00000561326 EVPLLA8MZ36 301 aa9.77□□□□□ -0.85
USP3-219ENST00000561326 P2RX6O15547 441 aa9.77□□□□□ -0.85
USP3-219ENST00000561326 PROM1O43490 865 aa9.77□□□□□ -0.85
USP3-219ENST00000561326 TMPRSS11DO60235 418 aa9.77□□□□□ -0.85
USP3-219ENST00000561326 DNAJA2O60884 412 aa9.77□□□□□ -0.85
USP3-219ENST00000561326 OR2B3O76000 313 aa9.77□□□□□ -0.85
USP3-219ENST00000561326 KLHL18O94889 574 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms