RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 RPTNQ6XPR3 784 aa12.79□□□□□ -0.36
SMAD3-214ENST00000560402 ASPGQ86U10 573 aa12.79□□□□□ -0.36
SMAD3-214ENST00000560402 CRLF3Q8IUI8 442 aa12.79□□□□□ -0.36
SMAD3-214ENST00000560402 OR51Q1Q8NH59 317 aa12.79□□□□□ -0.36
SMAD3-214ENST00000560402 MARVELD3Q96A59 401 aa12.79□□□□□ -0.36
SMAD3-214ENST00000560402 OR1F2PQ96R84 312 aa12.79□□□□□ -0.36
SMAD3-214ENST00000560402 SIKE1Q9BRV8 207 aa12.79□□□□□ -0.36
SMAD3-214ENST00000560402 HAUS8Q9BT25 410 aa12.79□□□□□ -0.36
SMAD3-214ENST00000560402 SGPP1Q9BX95 441 aa12.79□□□□□ -0.36
SMAD3-214ENST00000560402 SLC17A6Q9P2U8 582 aa12.79□□□□□ -0.36
SMAD3-214ENST00000560402 SEC14L3Q9UDX4 400 aa12.79□□□□□ -0.36
SMAD3-214ENST00000560402 ACOT9Q9Y305 439 aa12.79□□□□□ -0.36
SMAD3-214ENST00000560402 SLC22A7Q9Y694 548 aa12.79□□□□□ -0.36
SMAD3-214ENST00000560402 SCN3AQ9NY46 2000 aa12.79□□□□□ -0.36
SMAD3-214ENST00000560402 FAM95CA0A1B0GW59 222 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 PLIN3O60664 434 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 SEC24DO94855 1032 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-214ENST00000560402 HAUS5O94927 633 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 UNC5CO95185 931 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 HIST1H2AGP0C0S8 130 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-214ENST00000560402 HIST1H2ADP20671 130 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 BGNP21810 368 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 CA7P43166 264 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 RAB10P61026 200 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 STX3Q13277 289 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 HERC3Q15034 1050 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 ZNF766Q5HY98 468 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 AGTRAPQ6RW13 159 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 C6orf89Q6UWU4 347 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 TMEM207Q6UWW9 146 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 LANCL3Q6ZV70 420 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 TRPM8Q7Z2W7 1104 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 TBC1D1Q86TI0 1168 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-214ENST00000560402 LGI4Q8N135 537 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 ZNF808Q8N4W9 903 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-214ENST00000560402 TBC1D19Q8N5T2 526 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 GPATCH11Q8N954 259 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 M1APQ8TC57 530 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 TM4SF19Q96DZ7 209 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 MOCOSQ96EN8 888 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 HIST1H2AHQ96KK5 128 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 C7orf26Q96N11 449 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 HIST1H2AJQ99878 128 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 H2AFJQ9BTM1 129 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 SARGQ9BW04 601 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 PARVBQ9HBI1 364 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 HCN3Q9P1Z3 774 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 PDE10AQ9Y233 779 aa12.78□□□□□ -0.36
SMAD3-214ENST00000560402 MTO1Q9Y2Z2 717 aaKnown RBP12.78□□□□□ -0.36
SMAD3-214ENST00000560402 NCOA6Q14686 2063 aaPredicted RBP12.77□□□□□ -0.36
SMAD3-214ENST00000560402 F10P00742 488 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 SERPINE1P05121 402 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 C2P06681 752 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 F7P08709 466 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-214ENST00000560402 CPA3P15088 417 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 CASP6P55212 293 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 AP1S2P56377 157 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 CHI3L2Q15782 390 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 MEP1AQ16819 746 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 ACER2Q5QJU3 275 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 CAPN13Q6MZZ7 669 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-214ENST00000560402 FAM45BPQ6NSW5 357 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 BNC2Q6ZN30 1099 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-214ENST00000560402 PRSS41Q7RTY9 318 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 ANKRD37Q7Z713 158 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 SLC5A8Q8N695 610 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 TMEM178AQ8NBL3 297 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 MFSD9Q8NBP5 474 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 ZCCHC10Q8TBK6 192 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 FAM45AQ8TCE6 357 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 SLC13A3Q8WWT9 602 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 ATL1Q8WXF7 558 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 SCYL1Q96KG9 808 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 LPAR4Q99677 370 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 KCNK13Q9HB14 408 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 NMRAL1Q9HBL8 299 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 MMP25Q9NPA2 562 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 THAP1Q9NVV9 213 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 STMN3Q9NZ72 180 aa12.77□□□□□ -0.37
SMAD3-214ENST00000560402 TRGV8A0A0C4DH27 118 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 ARHGAP10A1A4S6 786 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 MAGEB17A8MXT2 336 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 SGK494L7N484 410 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 RDH16O75452 317 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 SNUPNO95149 360 aaKnown RBP12.76□□□□□ -0.37
SMAD3-214ENST00000560402 AHSGP02765 367 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 STATHP02808 62 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 PROCP04070 461 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 MYL2P10916 166 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 CDH1P12830 882 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 SAT1P21673 171 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 JAK1P23458 1154 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 PTGER4P35408 488 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 CCR8P51685 355 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 CORO7P57737 925 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 TAS2R50P59544 299 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 NAE1Q13564 534 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 FAM83EQ2M2I3 478 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 PAPD4Q6PIY7 484 aaKnown RBP12.76□□□□□ -0.37
SMAD3-214ENST00000560402 CMC1Q7Z7K0 106 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms