RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 HIST1H1TP22492 207 aaPredicted RBP8.54□□□□□ -1.04
HMG20A-209ENST00000559728 GRK2P25098 689 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 PTX3P26022 381 aaPredicted RBP8.54□□□□□ -1.04
HMG20A-209ENST00000559728 HSD3B2P26439 372 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 CERS1P27544 350 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 ITPKBP27987 946 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 TPP2P29144 1249 aaPredicted RBP8.54□□□□□ -1.04
HMG20A-209ENST00000559728 HMOX2P30519 316 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 DLSTP36957 453 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 ARL1P40616 181 aaPredicted RBP8.54□□□□□ -1.04
HMG20A-209ENST00000559728 HNRNPFP52597 415 aaKnown RBP8.54□□□□□ -1.04
HMG20A-209ENST00000559728 ARFIP1P53367 373 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 STXBP1P61764 594 aaKnown RBP8.54□□□□□ -1.04
HMG20A-209ENST00000559728 RAE1P78406 368 aaKnown RBP8.54□□□□□ -1.04
HMG20A-209ENST00000559728 ZNF33BQ06732 778 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 CSTF3Q12996 717 aaKnown RBP8.54□□□□□ -1.04
HMG20A-209ENST00000559728 STX3Q13277 289 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 DNASE1L3Q13609 305 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 IL10RAQ13651 578 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 ERV3-1Q14264 604 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 HERC3Q15034 1050 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 NDUFA9Q16795 377 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 VWA2Q5GFL6 755 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 SH2D4BQ5SQS7 431 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 C10orf62Q5T681 223 aaPredicted RBP8.54□□□□□ -1.04
HMG20A-209ENST00000559728 OR4C11Q6IEV9 310 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 CHSY3Q70JA7 882 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 ABHD13Q7L211 337 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 MAVSQ7Z434 540 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 CLYBLQ8N0X4 340 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 ZCCHC7Q8N3Z6 543 aaKnown RBP8.54□□□□□ -1.04
HMG20A-209ENST00000559728 AMER2Q8N7J2 671 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 GOLGA6L1Q8N7Z2 621 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 ENDOVQ8N8Q3 282 aaKnown RBP8.54□□□□□ -1.04
HMG20A-209ENST00000559728 ACOT4Q8N9L9 421 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 RAB3IL1Q8TBN0 382 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 ADAMTS17Q8TE56 1095 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 CHTF18Q8WVB6 975 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 KCNE4Q8WWG9 221 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 CKAP2Q8WWK9 683 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 UCN3Q969E3 161 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 REPS1Q96D71 796 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 APIPQ96GX9 242 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 CSF3RQ99062 836 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 SERPINI1Q99574 410 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 TBCDQ9BTW9 1192 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 TGIF2Q9GZN2 237 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 ANKHQ9HCJ1 492 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 PNPOQ9NVS9 261 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 FAM53CQ9NYF3 392 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 HCN3Q9P1Z3 774 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 IFT80Q9P2H3 777 aaPredicted RBP8.54□□□□□ -1.04
HMG20A-209ENST00000559728 FARSAQ9Y285 508 aaKnown RBP8.54□□□□□ -1.04
HMG20A-209ENST00000559728 RAP2CQ9Y3L5 183 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 MAP4K5Q9Y4K4 846 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 ASB4Q9Y574 426 aa8.54□□□□□ -1.04
HMG20A-209ENST00000559728 PCSK5Q92824 1860 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 LOC400499M0QZD8 3231 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 ACACBO00763 2458 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 FAM227AF5H4B4 570 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 TGFBR3LH3BV60 316 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 HSPA4LO95757 839 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 KRT6AP02538 564 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 GBAP04062 536 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 KRT6BP04259 564 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 ZGLP1P0C6A0 271 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 AGXTP21549 392 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 FBLP22087 321 aaKnown RBP8.53□□□□□ -1.04
HMG20A-209ENST00000559728 PRPH2P23942 346 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 PTPN4P29074 926 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 AVPR1BP47901 424 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 KRT6CP48668 564 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 MTTPP55157 894 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 LIM2P55344 173 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 HNRNPH2P55795 449 aaKnown RBP8.53□□□□□ -1.04
HMG20A-209ENST00000559728 RHAGQ02094 409 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 ATP1A1-AS1Q5TC04 95 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 ARHGAP40Q5TG30 622 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 MLIPQ5VWP3 458 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 TTC19Q6DKK2 380 aaPredicted RBP8.53□□□□□ -1.04
HMG20A-209ENST00000559728 RGS9BPQ6ZS82 235 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 SHISA6Q6ZSJ9 500 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 COMMD6Q7Z4G1 85 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 IL22RA1Q8N6P7 574 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 GBP7Q8N8V2 638 aaPredicted RBP8.53□□□□□ -1.04
HMG20A-209ENST00000559728 ZNF511Q8NB15 262 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 OR51Q1Q8NH59 317 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.53□□□□□ -1.04
HMG20A-209ENST00000559728 STT3BQ8TCJ2 826 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 AGR3Q8TD06 166 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 TWIST2Q8WVJ9 160 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 COL26A1Q96A83 441 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 RGMAQ96B86 450 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 SLC45A3Q96JT2 553 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 FCRL1Q96LA6 429 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 KCNC2Q96PR1 638 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 MAPKAP1Q9BPZ7 522 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 GPR87Q9BY21 358 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 SLC7A5P2Q9GIP4 190 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 ACBD3Q9H3P7 528 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms