RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 SELENOMQ8WWX9 145 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 TBC1D20Q96BZ9 403 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 RBCK1Q9BYM8 510 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 SHCBP1LQ9BZQ2 653 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 VN1R1Q9GZP7 353 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 MAN2B2Q9Y2E5 1009 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 KCNMB2Q9Y691 235 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 A0A088AWK7 358 aa19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 SOCS6O14544 535 aa19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 B3GALT2O43825 422 aa19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 FHP07954 510 aa19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 RNH1P13489 461 aaKnown RBP19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 ZNF10P21506 573 aaPredicted RBP19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 HMOX2P30519 316 aa19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 HTR6P50406 440 aa19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 AGBL2Q5U5Z8 902 aa19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 FAAH2Q6GMR7 532 aa19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 BORAQ6PGQ7 559 aa19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 KIRREL2Q6UWL6 708 aa19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 ZCCHC23Q6ZST2 131 aa19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 NUDCD3Q8IVD9 361 aa19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 NACC2Q96BF6 587 aa19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 PKNOX2Q96KN3 472 aa19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 OR1F2PQ96R84 312 aa19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 HBEGFQ99075 208 aa19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 SERPINI1Q99574 410 aa19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 ZNF717Q9BY31 904 aaPredicted RBP19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 ROGDIQ9GZN7 287 aa19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 VIPAS39Q9H9C1 493 aa19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 COPS7BQ9H9Q2 264 aaPredicted RBP19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 P4HTMQ9NXG6 502 aa19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 KCMF1Q9P0J7 381 aa19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 CHD6Q8TD26 2715 aa19.13■□□□□ 0.65
TSPAN3-207ENST00000559494 WDR91A4D1P6 747 aa19.12■□□□□ 0.65
TSPAN3-207ENST00000559494 NPHS1O60500 1241 aa19.12■□□□□ 0.65
TSPAN3-207ENST00000559494 B4GALT2O60909 372 aa19.12■□□□□ 0.65
TSPAN3-207ENST00000559494 SCELO95171 688 aa19.12■□□□□ 0.65
TSPAN3-207ENST00000559494 ZWINTO95229 277 aa19.12■□□□□ 0.65
TSPAN3-207ENST00000559494 KRT6AP02538 564 aa19.12■□□□□ 0.65
TSPAN3-207ENST00000559494 KRT6BP04259 564 aa19.12■□□□□ 0.65
TSPAN3-207ENST00000559494 HIST1H1TP22492 207 aaPredicted RBP19.12■□□□□ 0.65
TSPAN3-207ENST00000559494 BSGP35613 385 aa19.12■□□□□ 0.65
TSPAN3-207ENST00000559494 KRT6CP48668 564 aa19.12■□□□□ 0.65
TSPAN3-207ENST00000559494 RAP1GDS1P52306 607 aa19.12■□□□□ 0.65
TSPAN3-207ENST00000559494 ARFIP1P53367 373 aa19.12■□□□□ 0.65
TSPAN3-207ENST00000559494 LIM2P55344 173 aa19.12■□□□□ 0.65
TSPAN3-207ENST00000559494 TUBB8Q3ZCM7 444 aa19.12■□□□□ 0.65
TSPAN3-207ENST00000559494 MINDY4Q4G0A6 757 aa19.12■□□□□ 0.65
TSPAN3-207ENST00000559494 ATG14Q6ZNE5 492 aa19.12■□□□□ 0.65
TSPAN3-207ENST00000559494 MED25Q71SY5 747 aa19.12■□□□□ 0.65
TSPAN3-207ENST00000559494 IP6K3Q96PC2 410 aa19.12■□□□□ 0.65
TSPAN3-207ENST00000559494 CENPKQ9BS16 269 aa19.12■□□□□ 0.65
TSPAN3-207ENST00000559494 TRMOQ9BU70 441 aa19.12■□□□□ 0.65
TSPAN3-207ENST00000559494 BRF2Q9HAW0 419 aa19.12■□□□□ 0.65
TSPAN3-207ENST00000559494 DAPP1Q9UN19 280 aa19.12■□□□□ 0.65
TSPAN3-207ENST00000559494 TMEM120BA0PK00 339 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 ARGFXA6NJG6 315 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 H3BQF6 201 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 MASP2O00187 686 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 ALOX12BO75342 701 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 ULK1O75385 1050 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 EEDO75530 441 aaKnown RBP19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 CDC123O75794 336 aaPredicted RBP19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 CHRNGP07510 517 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 CHN1P15882 459 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 SERPINB3P29508 390 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 ARRB2P32121 409 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 SSR2P43308 183 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 BTG2P78543 158 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 RHAGQ02094 409 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 CHAF1BQ13112 559 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 ABRAXAS2Q15018 415 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 ARL13AQ5H913 290 aaPredicted RBP19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 MFSD4BQ5TF39 518 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 CES4AQ5XG92 561 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 PCSK4Q6UW60 755 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 TMEM205Q6UW68 189 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 SCIMPQ6UWF3 145 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 ANKRD42Q8N9B4 389 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 PLPP5Q8NEB5 264 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 APOBEC4Q8WW27 367 aaKnown RBP19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 C8orf44Q96CB5 159 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 SH3GL2Q99962 352 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 MAPKAP1Q9BPZ7 522 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 DDX31Q9H8H2 851 aaKnown RBP19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 ATRXP46100 2492 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 IGSF10Q6WRI0 2623 aa19.11■□□□□ 0.65
TSPAN3-207ENST00000559494 PSMD12O00232 456 aaPredicted RBP19.1■□□□□ 0.65
TSPAN3-207ENST00000559494 CYR61O00622 381 aa19.1■□□□□ 0.65
TSPAN3-207ENST00000559494 PEX12O00623 359 aa19.1■□□□□ 0.65
TSPAN3-207ENST00000559494 BIRC5O15392 142 aa19.1■□□□□ 0.65
TSPAN3-207ENST00000559494 SASH3O75995 380 aa19.1■□□□□ 0.65
TSPAN3-207ENST00000559494 SEMA3DO95025 777 aa19.1■□□□□ 0.65
TSPAN3-207ENST00000559494 TSFMP43897 325 aaKnown RBP19.1■□□□□ 0.65
TSPAN3-207ENST00000559494 WDR4P57081 412 aaKnown RBP19.1■□□□□ 0.65
TSPAN3-207ENST00000559494 RAB38P57729 211 aa19.1■□□□□ 0.65
TSPAN3-207ENST00000559494 SLAMF1Q13291 335 aa19.1■□□□□ 0.65
TSPAN3-207ENST00000559494 RCN2Q14257 317 aa19.1■□□□□ 0.65
TSPAN3-207ENST00000559494 CPZQ66K79 652 aa19.1■□□□□ 0.65
TSPAN3-207ENST00000559494 CUZD1Q86UP6 607 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms