RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 LANCL3Q6ZV70 420 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 EXD3Q8N9H8 876 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 ACOT4Q8N9L9 421 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 TSLPQ969D9 159 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 UCN3Q969E3 161 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 ATP6V1E2Q96A05 226 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 MIEF2Q96C03 454 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 C8orf44Q96CB5 159 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 C11orf24Q96F05 449 aaPredicted RBP10.78□□□□□ -0.68
SNX1-204ENST00000559061 CMTM7Q96FZ5 175 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 MAPKAP1Q9BPZ7 522 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 WDR77Q9BQA1 342 aaPredicted RBP10.78□□□□□ -0.68
SNX1-204ENST00000559061 SLC29A3Q9BZD2 475 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 ACPTQ9BZG2 426 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 MID1IP1Q9NPA3 183 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 C14orf105Q9NVL8 296 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 PSD3Q9NYI0 1048 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 GPN3Q9UHW5 284 aaPredicted RBP10.78□□□□□ -0.68
SNX1-204ENST00000559061 C3orf18Q9UK00 162 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 NXT1Q9UKK6 140 aaKnown RBP10.78□□□□□ -0.68
SNX1-204ENST00000559061 LHX6Q9UPM6 363 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 PADI2Q9Y2J8 665 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 BOD1L1Q8NFC6 3051 aa10.77□□□□□ -0.68
SNX1-204ENST00000559061 K7EM74 188 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 TM9SF1O15321 606 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 NPHS1O60500 1241 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 LYPLA1O75608 230 aaPredicted RBP10.77□□□□□ -0.69
SNX1-204ENST00000559061 ENO1P06733 434 aaKnown RBP10.77□□□□□ -0.69
SNX1-204ENST00000559061 FHP07954 510 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 PIM1P11309 404 aaPredicted RBP10.77□□□□□ -0.69
SNX1-204ENST00000559061 COX6A1P12074 109 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 HIST1H1TP22492 207 aaPredicted RBP10.77□□□□□ -0.69
SNX1-204ENST00000559061 TPP2P29144 1249 aaPredicted RBP10.77□□□□□ -0.69
SNX1-204ENST00000559061 SERPINB3P29508 390 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 MTTPP55157 894 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 RAE1P78406 368 aaKnown RBP10.77□□□□□ -0.69
SNX1-204ENST00000559061 PCOLCEQ15113 449 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 TMEM35AQ53FP2 167 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 ARL13AQ5H913 290 aaPredicted RBP10.77□□□□□ -0.69
SNX1-204ENST00000559061 AGBL2Q5U5Z8 902 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 KANK2Q63ZY3 851 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 TRIM40Q6P9F5 258 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 CROCCP2Q86T23 111 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 CUZD1Q86UP6 607 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 SCUBE1Q8IWY4 988 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 OR11G2Q8NGC1 345 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 OR2T11Q8NH01 316 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 PPP4R1Q8TF05 950 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 TBC1D20Q96BZ9 403 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 KCNC2Q96PR1 638 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 OR1F2PQ96R84 312 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 SERINC2Q96SA4 455 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 SORT1Q99523 831 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 CRB3Q9BUF7 120 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 MRPL1Q9BYD6 325 aaKnown RBP10.77□□□□□ -0.69
SNX1-204ENST00000559061 SEMA4CQ9C0C4 833 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 IQCGQ9H095 443 aaKnown RBP10.77□□□□□ -0.69
SNX1-204ENST00000559061 DDX31Q9H8H2 851 aaKnown RBP10.77□□□□□ -0.69
SNX1-204ENST00000559061 VIPAS39Q9H9C1 493 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 NECTIN3Q9NQS3 549 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 P4HTMQ9NXG6 502 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 ADGRE2Q9UHX3 823 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 MID2Q9UJV3 735 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 FBXL4Q9UKA2 621 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 DAPP1Q9UN19 280 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 ASB4Q9Y574 426 aa10.77□□□□□ -0.69
SNX1-204ENST00000559061 CPAMD8Q8IZJ3 1885 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 ATRXP46100 2492 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 UQCRHLA0A096LP55 91 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 IGHV3-20A0A0C4DH32 117 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 SERTM1A2A2V5 107 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 WDR91A4D1P6 747 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 WASHC1A8K0Z3 465 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 SEMA3DO95025 777 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 ZWINTO95229 277 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 GBAP04062 536 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 PDGFAP04085 211 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 ITGB2P05107 769 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 JUNP05412 331 aaKnown RBP10.76□□□□□ -0.69
SNX1-204ENST00000559061 UQCRHP07919 91 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 CELA2AP08217 269 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 PTX3P26022 381 aaPredicted RBP10.76□□□□□ -0.69
SNX1-204ENST00000559061 ARL1P40616 181 aaPredicted RBP10.76□□□□□ -0.69
SNX1-204ENST00000559061 SLC18A1P54219 525 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 RAB38P57729 211 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 HMGCS1Q01581 520 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 MC1RQ01726 317 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 OCA2Q04671 838 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 RCN2Q14257 317 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 FAAH2Q6GMR7 532 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 OR4C11Q6IEV9 310 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 RIPOR1Q6ZS17 1223 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 HDXQ7Z353 690 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 MMP21Q8N119 569 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 METTL4Q8N3J2 472 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 ZCCHC7Q8N3Z6 543 aaKnown RBP10.76□□□□□ -0.69
SNX1-204ENST00000559061 FAM47BQ8NA70 645 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 SELENOMQ8WWX9 145 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 REPS1Q96D71 796 aa10.76□□□□□ -0.69
SNX1-204ENST00000559061 APIPQ96GX9 242 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms