RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 OR52K1Q8NGK4 314 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 ACTL9Q8TC94 416 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 MAGEC3Q8TD91 643 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 HSPBAP1Q96EW2 488 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 MARK4Q96L34 752 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 WFIKKN1Q96NZ8 548 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 TIMP4Q99727 224 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 PRDM9Q9NQV7 894 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 SACM1LQ9NTJ5 587 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 SPTLC3Q9NUV7 552 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 ZNF701Q9NV72 531 aaPredicted RBP10.9□□□□□ -0.66
SMAD3-206ENST00000558739 ZNHIT6Q9NWK9 470 aaKnown RBP10.9□□□□□ -0.66
SMAD3-206ENST00000558739 ZFATQ9P243 1243 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 PCDHGB3Q9Y5G1 929 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 SLC22A7Q9Y694 548 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 BZW2Q9Y6E2 419 aaKnown RBP10.9□□□□□ -0.66
SMAD3-206ENST00000558739 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.9□□□□□ -0.66
SMAD3-206ENST00000558739 YLPM1P49750 1951 aaKnown RBP10.89□□□□□ -0.67
SMAD3-206ENST00000558739 MYOCOSA0A1B0GUC4 107 aa10.89□□□□□ -0.67
SMAD3-206ENST00000558739 SMTNL1A8MU46 457 aa10.89□□□□□ -0.67
SMAD3-206ENST00000558739 F8W8V4 182 aa10.89□□□□□ -0.67
SMAD3-206ENST00000558739 APOC4-APOC2K7ER74 178 aa10.89□□□□□ -0.67
SMAD3-206ENST00000558739 SNPHO15079 494 aa10.89□□□□□ -0.67
SMAD3-206ENST00000558739 NDUFS4O43181 175 aa10.89□□□□□ -0.67
SMAD3-206ENST00000558739 SYF2O95926 243 aaKnown RBP10.89□□□□□ -0.67
SMAD3-206ENST00000558739 APOC2P02655 101 aa10.89□□□□□ -0.67
SMAD3-206ENST00000558739 ZNF888P0CJ79 500 aaPredicted RBP10.89□□□□□ -0.67
SMAD3-206ENST00000558739 PAX1P15863 534 aa10.89□□□□□ -0.67
SMAD3-206ENST00000558739 SLCO1A2P46721 670 aa10.89□□□□□ -0.67
SMAD3-206ENST00000558739 HNRNPFP52597 415 aaKnown RBP10.89□□□□□ -0.67
SMAD3-206ENST00000558739 EIF3BP55884 814 aaKnown RBP10.89□□□□□ -0.67
SMAD3-206ENST00000558739 TBPL1P62380 186 aa10.89□□□□□ -0.67
SMAD3-206ENST00000558739 MEF2AQ02078 507 aaPredicted RBP10.89□□□□□ -0.67
SMAD3-206ENST00000558739 DUSP8Q13202 625 aa10.89□□□□□ -0.67
SMAD3-206ENST00000558739 HERC3Q15034 1050 aa10.89□□□□□ -0.67
SMAD3-206ENST00000558739 CLEC12BQ2HXU8 276 aa10.89□□□□□ -0.67
SMAD3-206ENST00000558739 FASTKD1Q53R41 847 aaKnown RBP10.89□□□□□ -0.67
SMAD3-206ENST00000558739 MEI1Q5TIA1 1274 aa10.89□□□□□ -0.67
SMAD3-206ENST00000558739 CAPN13Q6MZZ7 669 aaPredicted RBP10.89□□□□□ -0.67
SMAD3-206ENST00000558739 C22orf34Q6ZV56 151 aa10.89□□□□□ -0.67
SMAD3-206ENST00000558739 SLC44A1Q8WWI5 657 aa10.89□□□□□ -0.67
SMAD3-206ENST00000558739 ROBO4Q8WZ75 1007 aa10.89□□□□□ -0.67
SMAD3-206ENST00000558739 ZBED6CLQ96FA7 236 aaPredicted RBP10.89□□□□□ -0.67
SMAD3-206ENST00000558739 EBNA1BP2Q99848 306 aaKnown RBP10.89□□□□□ -0.67
SMAD3-206ENST00000558739 PROK2Q9HC23 129 aa10.89□□□□□ -0.67
SMAD3-206ENST00000558739 SH2D2AQ9NP31 389 aa10.89□□□□□ -0.67
SMAD3-206ENST00000558739 SAMD15Q9P1V8 674 aa10.89□□□□□ -0.67
SMAD3-206ENST00000558739 LCMT1Q9UIC8 334 aa10.89□□□□□ -0.67
SMAD3-206ENST00000558739 PPIEQ9UNP9 301 aaKnown RBP10.89□□□□□ -0.67
SMAD3-206ENST00000558739 MRFAP1Q9Y605 127 aa10.89□□□□□ -0.67
SMAD3-206ENST00000558739 CADP27708 2225 aa10.89□□□□□ -0.67
SMAD3-206ENST00000558739 RYR3Q15413 4870 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 MBD3L3A6NE82 208 aaPredicted RBP10.88□□□□□ -0.67
SMAD3-206ENST00000558739 AHRRA9YTQ3 701 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 SPOPO43791 374 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 GPRIN2O60269 458 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 CEP104O60308 925 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 ZFAND5O76080 213 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 P04436 131 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 F7P08709 466 aaPredicted RBP10.88□□□□□ -0.67
SMAD3-206ENST00000558739 SLC35G6P0C7Q6 338 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 TMIGD3P0DMS9 266 aaPredicted RBP10.88□□□□□ -0.67
SMAD3-206ENST00000558739 ALOX12P18054 663 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 PTMSP20962 102 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 IMPA1P29218 277 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 OPRM1P35372 400 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 GRIA1P42261 906 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 KLHL38Q2WGJ6 581 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 C6orf52Q5T4I8 152 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 TSTD2Q5T7W7 516 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 HECTD2Q5U5R9 776 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 GCNT2Q8N0V5 402 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 LRRC25Q8N386 305 aaPredicted RBP10.88□□□□□ -0.67
SMAD3-206ENST00000558739 GOLM1Q8NBJ4 401 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 TMEM52Q8NDY8 209 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 MBD3L2Q8NHZ7 208 aaPredicted RBP10.88□□□□□ -0.67
SMAD3-206ENST00000558739 ANKRD9Q96BM1 317 aaPredicted RBP10.88□□□□□ -0.67
SMAD3-206ENST00000558739 BIRC8Q96P09 236 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 PANX3Q96QZ0 392 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 SLC30A3Q99726 388 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 AMBRA1Q9C0C7 1298 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 PRDM14Q9GZV8 571 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 LRRC40Q9H9A6 602 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 HOMER3Q9NSC5 361 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 CATSPERZQ9NTU4 200 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 TMEM184CQ9NVA4 438 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 CAMK2AQ9UQM7 478 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 SLC6A5Q9Y345 797 aa10.88□□□□□ -0.67
SMAD3-206ENST00000558739 A0A1B0GTH6 734 aa10.87□□□□□ -0.67
SMAD3-206ENST00000558739 SYCE3A1L190 88 aa10.87□□□□□ -0.67
SMAD3-206ENST00000558739 ERN1O75460 977 aaKnown RBP10.87□□□□□ -0.67
SMAD3-206ENST00000558739 IL18BPO95998 194 aa10.87□□□□□ -0.67
SMAD3-206ENST00000558739 TMEM253P0C7T8 217 aa10.87□□□□□ -0.67
SMAD3-206ENST00000558739 RBP3P10745 1247 aa10.87□□□□□ -0.67
SMAD3-206ENST00000558739 CDH1P12830 882 aa10.87□□□□□ -0.67
SMAD3-206ENST00000558739 CRYGSP22914 178 aa10.87□□□□□ -0.67
SMAD3-206ENST00000558739 CTNNA2P26232 953 aa10.87□□□□□ -0.67
SMAD3-206ENST00000558739 HNF4AP41235 474 aa10.87□□□□□ -0.67
SMAD3-206ENST00000558739 EIF3EP60228 445 aaKnown RBP10.87□□□□□ -0.67
SMAD3-206ENST00000558739 RAB8AP61006 207 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms