RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 CHST10O43529 356 aa16.49■□□□□ 0.23
TPM1-214ENST00000558544 KLF7O75840 302 aaPredicted RBP16.49■□□□□ 0.23
TPM1-214ENST00000558544 SEMA3DO95025 777 aa16.49■□□□□ 0.23
TPM1-214ENST00000558544 ZGLP1P0C6A0 271 aa16.49■□□□□ 0.23
TPM1-214ENST00000558544 HIST1H1TP22492 207 aaPredicted RBP16.49■□□□□ 0.23
TPM1-214ENST00000558544 ATP5A1P25705 553 aaKnown RBP16.49■□□□□ 0.23
TPM1-214ENST00000558544 FOLR3P41439 243 aa16.49■□□□□ 0.23
TPM1-214ENST00000558544 HMGCS1Q01581 520 aa16.49■□□□□ 0.23
TPM1-214ENST00000558544 RUNX2Q13950 521 aa16.49■□□□□ 0.23
TPM1-214ENST00000558544 OR4C11Q6IEV9 310 aa16.49■□□□□ 0.23
TPM1-214ENST00000558544 TRIM42Q8IWZ5 723 aa16.49■□□□□ 0.23
TPM1-214ENST00000558544 CLYBLQ8N0X4 340 aa16.49■□□□□ 0.23
TPM1-214ENST00000558544 CA13Q8N1Q1 262 aa16.49■□□□□ 0.23
TPM1-214ENST00000558544 ZNF781Q8N8C0 355 aa16.49■□□□□ 0.23
TPM1-214ENST00000558544 RAB3IL1Q8TBN0 382 aa16.49■□□□□ 0.23
TPM1-214ENST00000558544 DYDC1Q8WWB3 177 aa16.49■□□□□ 0.23
TPM1-214ENST00000558544 SORT1Q99523 831 aa16.49■□□□□ 0.23
TPM1-214ENST00000558544 ZNF717Q9BY31 904 aaPredicted RBP16.49■□□□□ 0.23
TPM1-214ENST00000558544 ROGDIQ9GZN7 287 aa16.49■□□□□ 0.23
TPM1-214ENST00000558544 MANSC1Q9H8J5 431 aa16.49■□□□□ 0.23
TPM1-214ENST00000558544 WDR54Q9H977 334 aa16.49■□□□□ 0.23
TPM1-214ENST00000558544 MED4Q9NPJ6 270 aa16.49■□□□□ 0.23
TPM1-214ENST00000558544 PTGDR2Q9Y5Y4 395 aa16.49■□□□□ 0.23
TPM1-214ENST00000558544 USP24Q9UPU5 2620 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 PTPRQQ9UMZ3 2332 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 DSPP15924 2871 aaKnown RBP16.48■□□□□ 0.23
TPM1-214ENST00000558544 JRKO75564 520 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 CREG1O75629 220 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 SCELO95171 688 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 CHEK2O96017 543 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 FGF4P08620 206 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 CD63P08962 238 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 BSGP35613 385 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 TSFMP43897 325 aaKnown RBP16.48■□□□□ 0.23
TPM1-214ENST00000558544 ZNF33BQ06732 778 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 KLC1Q07866 573 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 IL10RAQ13651 578 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 ERV3-1Q14264 604 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 ST3GAL2Q16842 350 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 IMPG1Q17R60 797 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 ATG16L1Q676U5 607 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 CCDC81Q6ZN84 652 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 NUDT13Q86X67 352 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 GBP7Q8N8V2 638 aaPredicted RBP16.48■□□□□ 0.23
TPM1-214ENST00000558544 ACOT4Q8N9L9 421 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 OR2Y1Q8NGV0 311 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 TWIST2Q8WVJ9 160 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 NPLQ9BXD5 320 aaPredicted RBP16.48■□□□□ 0.23
TPM1-214ENST00000558544 FAM117AQ9C073 453 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 CPNE5Q9HCH3 593 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 INTS9Q9NV88 658 aaKnown RBP16.48■□□□□ 0.23
TPM1-214ENST00000558544 C14orf105Q9NVL8 296 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 NMRK1Q9NWW6 199 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 VPS29Q9UBQ0 182 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 NXT1Q9UKK6 140 aaKnown RBP16.48■□□□□ 0.23
TPM1-214ENST00000558544 RAP2CQ9Y3L5 183 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 DNAJC15Q9Y5T4 150 aa16.48■□□□□ 0.23
TPM1-214ENST00000558544 LOC400499M0QZD8 3231 aa16.47■□□□□ 0.23
TPM1-214ENST00000558544 PCSK5Q92824 1860 aa16.47■□□□□ 0.23
TPM1-214ENST00000558544 SERTM1A2A2V5 107 aa16.47■□□□□ 0.23
TPM1-214ENST00000558544 EEDO75530 441 aaKnown RBP16.47■□□□□ 0.23
TPM1-214ENST00000558544 BMP10O95393 424 aa16.47■□□□□ 0.23
TPM1-214ENST00000558544 GBAP04062 536 aa16.47■□□□□ 0.23
TPM1-214ENST00000558544 UMODP07911 640 aa16.47■□□□□ 0.23
TPM1-214ENST00000558544 RNH1P13489 461 aaKnown RBP16.47■□□□□ 0.23
TPM1-214ENST00000558544 ARFIP1P53367 373 aa16.47■□□□□ 0.23
TPM1-214ENST00000558544 LIM2P55344 173 aa16.47■□□□□ 0.23
TPM1-214ENST00000558544 TMPRSS3P57727 454 aa16.47■□□□□ 0.23
TPM1-214ENST00000558544 TBL3Q12788 808 aaKnown RBP16.47■□□□□ 0.23
TPM1-214ENST00000558544 UGT3A2Q3SY77 523 aa16.47■□□□□ 0.23
TPM1-214ENST00000558544 ATP1A1-AS1Q5TC04 95 aa16.47■□□□□ 0.23
TPM1-214ENST00000558544 MFSD4BQ5TF39 518 aa16.47■□□□□ 0.23
TPM1-214ENST00000558544 LAPTM4BQ86VI4 370 aa16.47■□□□□ 0.23
TPM1-214ENST00000558544 DDIASQ8IXT1 998 aa16.47■□□□□ 0.23
TPM1-214ENST00000558544 METTL4Q8N3J2 472 aa16.47■□□□□ 0.23
TPM1-214ENST00000558544 MAPKAP1Q9BPZ7 522 aa16.47■□□□□ 0.23
TPM1-214ENST00000558544 TGIF2Q9GZN2 237 aa16.47■□□□□ 0.23
TPM1-214ENST00000558544 ILKAPQ9H0C8 392 aaPredicted RBP16.47■□□□□ 0.23
TPM1-214ENST00000558544 TUBB1Q9H4B7 451 aa16.47■□□□□ 0.23
TPM1-214ENST00000558544 CLK4Q9HAZ1 481 aaKnown RBP16.47■□□□□ 0.23
TPM1-214ENST00000558544 AHSPQ9NZD4 102 aa16.47■□□□□ 0.23
TPM1-214ENST00000558544 DAPP1Q9UN19 280 aa16.47■□□□□ 0.23
TPM1-214ENST00000558544 ZNF891A8MT65 544 aaPredicted RBP16.46■□□□□ 0.23
TPM1-214ENST00000558544 PSMD12O00232 456 aaPredicted RBP16.46■□□□□ 0.23
TPM1-214ENST00000558544 PIP5K1BO14986 540 aa16.46■□□□□ 0.23
TPM1-214ENST00000558544 NKX2-8O15522 239 aa16.46■□□□□ 0.23
TPM1-214ENST00000558544 SNNO75324 88 aaPredicted RBP16.46■□□□□ 0.23
TPM1-214ENST00000558544 SKAP2O75563 359 aaPredicted RBP16.46■□□□□ 0.23
TPM1-214ENST00000558544 CDC123O75794 336 aaPredicted RBP16.46■□□□□ 0.23
TPM1-214ENST00000558544 SNUPNO95149 360 aaKnown RBP16.46■□□□□ 0.23
TPM1-214ENST00000558544 FHP07954 510 aa16.46■□□□□ 0.23
TPM1-214ENST00000558544 PRKAR1AP10644 381 aa16.46■□□□□ 0.23
TPM1-214ENST00000558544 UCNP55089 124 aa16.46■□□□□ 0.23
TPM1-214ENST00000558544 RAB38P57729 211 aa16.46■□□□□ 0.23
TPM1-214ENST00000558544 BTKQ06187 659 aa16.46■□□□□ 0.23
TPM1-214ENST00000558544 SLAMF1Q13291 335 aa16.46■□□□□ 0.23
TPM1-214ENST00000558544 MINDY4Q4G0A6 757 aa16.46■□□□□ 0.23
TPM1-214ENST00000558544 CYP20A1Q6UW02 462 aa16.46■□□□□ 0.23
TPM1-214ENST00000558544 COMMD6Q7Z4G1 85 aa16.46■□□□□ 0.23
TPM1-214ENST00000558544 TRIM46Q7Z4K8 759 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms