RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 DNAJB13P59910 316 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 EEF1A2Q05639 463 aaKnown RBP11.65□□□□□ -0.54
SMAD3-205ENST00000558428 LCP2Q13094 533 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 RUNX2Q13950 521 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 AP5B1Q2VPB7 878 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 CFAP157Q5JU67 520 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 ZNF793Q6ZN11 406 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 GPRIN3Q6ZVF9 776 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 UBE3DQ7Z6J8 389 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 C10orf107Q8IVU9 208 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 OR11G2Q8NGC1 345 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 TCP10LQ8TDR4 215 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 RGMAQ96B86 450 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 ABHD17AQ96GS6 310 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 SERINC2Q96SA4 455 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 SEMA4CQ9C0C4 833 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 GSTO2Q9H4Y5 243 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 ELOVL6Q9H5J4 265 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 PRDM7Q9NQW5 492 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 LANCL2Q9NS86 450 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 OXSMQ9NWU1 459 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 SLC17A7Q9P2U7 560 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 TRPS1Q9UHF7 1281 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 TUBD1Q9UJT1 453 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 ZNF225Q9UK10 706 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 SNX6Q9UNH7 406 aa11.65□□□□□ -0.54
SMAD3-205ENST00000558428 A6NL46 340 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 KALRNO60229 2985 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 B4GALT2O60909 372 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 ETHE1O95571 254 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 HPP00738 406 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 HIST1H1TP22492 207 aaPredicted RBP11.64□□□□□ -0.55
SMAD3-205ENST00000558428 ATP5A1P25705 553 aaKnown RBP11.64□□□□□ -0.55
SMAD3-205ENST00000558428 PKNOX1P55347 436 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 RAB38P57729 211 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 NAA20P61599 178 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 RHAGQ02094 409 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 CUL3Q13618 768 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 PCLAFQ15004 111 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 ABRAXAS2Q15018 415 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 SGO1Q5FBB7 561 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 C10orf62Q5T681 223 aaPredicted RBP11.64□□□□□ -0.55
SMAD3-205ENST00000558428 LIPMQ5VYY2 423 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 FAM219BQ5XKK7 198 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 OR4C11Q6IEV9 310 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 TMEM205Q6UW68 189 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 LANCL3Q6ZV70 420 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 CDYL2Q8N8U2 506 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 ACOT4Q8N9L9 421 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 PLPP5Q8NEB5 264 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 MYRIPQ8NFW9 859 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 C9orf43Q8TAL5 461 aaPredicted RBP11.64□□□□□ -0.55
SMAD3-205ENST00000558428 ADAMTS18Q8TE60 1221 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 SELENOMQ8WWX9 145 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 SERPINI1Q99574 410 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 SLC25A23Q9BV35 468 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 SORBS1Q9BX66 1292 aaKnown RBP11.64□□□□□ -0.55
SMAD3-205ENST00000558428 ATP13A2Q9NQ11 1180 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 PSD3Q9NYI0 1048 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 C19orf25Q9UFG5 118 aaPredicted RBP11.64□□□□□ -0.55
SMAD3-205ENST00000558428 PPT2Q9UMR5 302 aa11.64□□□□□ -0.55
SMAD3-205ENST00000558428 G3BP2Q9UN86 482 aaKnown RBP11.64□□□□□ -0.55
SMAD3-205ENST00000558428 LOC102723996A0A087X1L8 192 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 IGHV1-45A0A0A0MS14 117 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 NSG1A0A0A6YYJ2 146 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 FAM227AF5H4B4 570 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 PLPP1O14494 284 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 CTIFO43310 598 aaKnown RBP11.63□□□□□ -0.55
SMAD3-205ENST00000558428 TYROBPO43914 113 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 PRMT3O60678 531 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 TRIM13O60858 407 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 ESRRBO95718 433 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 PDYNP01213 254 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 PRB1P04280 392 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 ENO1P06733 434 aaKnown RBP11.63□□□□□ -0.55
SMAD3-205ENST00000558428 MYZAPP0CAP1 466 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 COX6A1P12074 109 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 ITGA3P26006 1051 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 HMOX2P30519 316 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 TSFMP43897 325 aaKnown RBP11.63□□□□□ -0.55
SMAD3-205ENST00000558428 LIM2P55344 173 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 BTG2P78543 158 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 ASPHQ12797 758 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 AIMP2Q13155 320 aaKnown RBP11.63□□□□□ -0.55
SMAD3-205ENST00000558428 RAPSNQ13702 412 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 RCN2Q14257 317 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 NSDHLQ15738 373 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 TCHHL1Q5QJ38 904 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-205ENST00000558428 QSOX2Q6ZRP7 698 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 FRMD7Q6ZUT3 714 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 NDUFAF7Q7L592 441 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 CPEB2Q7Z5Q1 589 aaKnown RBP11.63□□□□□ -0.55
SMAD3-205ENST00000558428 ANKRD37Q7Z713 158 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 EXOC3L1Q86VI1 746 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 PARP9Q8IXQ6 854 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 GALNT16Q8N428 558 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 FAM47BQ8NA70 645 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 FDCSPQ8NFU4 85 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 METTL6Q8TCB7 284 aa11.63□□□□□ -0.55
SMAD3-205ENST00000558428 AGAP11Q8TF27 550 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms