RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 BMPR2Q13873 1038 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 SLBPQ14493 270 aaKnown RBP eCLIP12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 ZNF460Q14592 562 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 PAGE2BQ5JRK9 111 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 SULT1C3Q6IMI6 304 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 MAATS1Q7Z4T9 603 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 SIAH3Q8IW03 269 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 CEP97Q8IW35 865 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 CYP4Z2PQ8N1L4 340 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 CPSF7Q8N684 471 aaKnown RBP12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 SRFBP1Q8NEF9 429 aaKnown RBP12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 OR2L5Q8NG80 312 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 AGAP11Q8TF27 550 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 ANKRD49Q8WVL7 239 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 MTFMTQ96DP5 389 aaKnown RBP12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 PDLIM2Q96JY6 352 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 SERINC2Q96SA4 455 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 VKORC1Q9BQB6 163 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 WDR83Q9BRX9 315 aaKnown RBP12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 ROGDIQ9GZN7 287 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 REXO4Q9GZR2 422 aaKnown RBP12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 COPS7BQ9H9Q2 264 aaPredicted RBP12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 TIMMDC1Q9NPL8 285 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 DNAJC11Q9NVH1 559 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 WWOXQ9NZC7 414 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 COQ3Q9NZJ6 369 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 PPIEQ9UNP9 301 aaKnown RBP12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 ERVK-11Q9UQG0 969 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 YARS2Q9Y2Z4 477 aaKnown RBP12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 SNX24Q9Y343 169 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 CLCA3PQ9Y6N3 262 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 SPACA6W5XKT8 324 aa12.71□□□□□ -0.37
SNRPA1-204ENST00000558020 EIF3HO15372 352 aaKnown RBP eCLIP12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 PEX1O43933 1283 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 ITGA10O75578 1167 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 STK16O75716 305 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 WISP2O76076 250 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 IFNA16P05015 189 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 PTGS2P35354 604 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 RPL21P46778 160 aaKnown RBP12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 SSR4P51571 173 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 PLA2G16P53816 162 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 MTTPP55157 894 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 RAB38P57729 211 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 ADORA2A-AS1P86434 159 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 STX4Q12846 297 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 RUNX2Q13950 521 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 XKR6Q5GH73 641 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 PAOXQ6QHF9 649 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 CYS1Q717R9 158 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 DOLPP1Q86YN1 238 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 SULF2Q8IWU5 870 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 GPALPP1Q8IXQ4 340 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 SNX31Q8N9S9 440 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 APCDD1LQ8NCL9 501 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 CA5BP1Q8WTZ4 195 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 PHF10Q8WUB8 498 aaKnown RBP12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 DAZLQ92904 295 aaKnown RBP12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 UBE2E3Q969T4 207 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 PTCD3Q96EY7 689 aaKnown RBP12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 PHF12Q96QT6 1004 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 KRT12Q99456 494 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 CPNE1Q99829 537 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 EFCAB11Q9BUY7 163 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 ADAP2Q9NPF8 381 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 CD274Q9NZQ7 290 aa12.7□□□□□ -0.38
SNRPA1-204ENST00000558020 CTAGE15A4D2H0 777 aa12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 USP27XA6NNY8 438 aa12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 CTNSO60931 367 aa12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 TUBB4AP04350 444 aa12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 SNRPB2P08579 225 aaKnown RBP12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 GSTA2P09210 222 aa12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 TNNI3P19429 210 aa12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 TFEBP19484 476 aa12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 SSTR2P30874 369 aa12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 HNRNPH1P31943 449 aaKnown RBP12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 KCNC1P48547 511 aa12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 MEOX1P50221 254 aa12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 FASTKD3Q14CZ7 662 aaKnown RBP12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 ELAVL1Q15717 326 aaKnown RBP12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 PDK4Q16654 411 aa12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 TMEM211Q6ICI0 200 aa12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 HSDL2Q6YN16 418 aa12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 CAPN12Q6ZSI9 719 aa12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 C3orf62Q6ZUJ4 267 aa12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 CTAGE6Q86UF2 777 aa12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 ZNF227Q86WZ6 799 aa12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 SCUBE1Q8IWY4 988 aa12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 KCNC2Q96PR1 638 aa12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 ERP44Q9BS26 406 aa12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 WHRNQ9P202 907 aa12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 PPT2Q9UMR5 302 aa12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 MTO1Q9Y2Z2 717 aaKnown RBP12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 PCNX1Q96RV3 2341 aa12.69□□□□□ -0.38
SNRPA1-204ENST00000558020 GTF3C1Q12789 2109 aa12.68□□□□□ -0.38
SNRPA1-204ENST00000558020 A0A0G2JN53 185 aa12.68□□□□□ -0.38
SNRPA1-204ENST00000558020 FAM187AA6NFU0 413 aa12.68□□□□□ -0.38
SNRPA1-204ENST00000558020 A8MVJ9 347 aa12.68□□□□□ -0.38
SNRPA1-204ENST00000558020 TP73O15350 636 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms