RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 KHDRBS2Q5VWX1 349 aaKnown RBP11.76□□□□□ -0.53
SLIRP-209ENST00000557342 TTC19Q6DKK2 380 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-209ENST00000557342 RIPOR1Q6ZS17 1223 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 SH2D5Q6ZV89 423 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 MILR1Q7Z6M3 343 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 ANKRD37Q7Z713 158 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 ARMC2Q8NEN0 867 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 OR52B6Q8NGF0 335 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 OR2W6PQ8NHA6 318 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 TM9SF4Q92544 642 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 RGMAQ96B86 450 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 THOC3Q96J01 351 aaKnown RBP11.76□□□□□ -0.53
SLIRP-209ENST00000557342 NSUN5Q96P11 429 aaKnown RBP11.76□□□□□ -0.53
SLIRP-209ENST00000557342 AGAP4Q96P64 663 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 ZNF552Q9H707 407 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-209ENST00000557342 ZBTB26Q9HCK0 441 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 SEMA4BQ9NPR2 832 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-209ENST00000557342 DMRT3Q9NQL9 472 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 PRDM9Q9NQV7 894 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 PRDM7Q9NQW5 492 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 MID2Q9UJV3 735 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 PPT2Q9UMR5 302 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 MMACHCQ9Y4U1 282 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 SPACA6W5XKT8 324 aa11.76□□□□□ -0.53
SLIRP-209ENST00000557342 MASP2O00187 686 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 SUV39H1O43463 412 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 SCELO95171 688 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 MLYCDO95822 493 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 PDGFAP04085 211 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 SERPINA7P05543 415 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 CERS1P27544 350 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 SSR2P43308 183 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 EFNA3P52797 238 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 RPS13P62277 151 aaKnown RBP11.75□□□□□ -0.53
SLIRP-209ENST00000557342 CLCQ05315 142 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 SLC18A2Q05940 514 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 ACTN3Q08043 901 aaPredicted RBP11.75□□□□□ -0.53
SLIRP-209ENST00000557342 IFT88Q13099 833 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 TRAF3Q13114 568 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 CUL3Q13618 768 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 RUNX2Q13950 521 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 FRG2Q64ET8 278 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 JMJD6Q6NYC1 403 aaPredicted RBP11.75□□□□□ -0.53
SLIRP-209ENST00000557342 ATG14Q6ZNE5 492 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 LANCL3Q6ZV70 420 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 C7orf57Q8NEG2 295 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 OR4F6Q8NGB9 312 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 WDR20Q8TBZ3 569 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 RDH11Q8TC12 318 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 L3HYPDHQ96EM0 354 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 PTCHD1Q96NR3 888 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 CDK15Q96Q40 435 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 FRG2BQ96QU4 278 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 MTERF1Q99551 399 aaKnown RBP11.75□□□□□ -0.53
SLIRP-209ENST00000557342 LPAR4Q99677 370 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 OR51B5Q9H339 312 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 LYRM4Q9HD34 91 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 LGALS13Q9UHV8 139 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 DAPP1Q9UN19 280 aa11.75□□□□□ -0.53
SLIRP-209ENST00000557342 BLACEA4D250 179 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 SLC28A2O43868 658 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 SEC24DO94855 1032 aaPredicted RBP11.74□□□□□ -0.53
SLIRP-209ENST00000557342 PROCP04070 461 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 PRR35P0CG20 571 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 HIST1H1TP22492 207 aaPredicted RBP11.74□□□□□ -0.53
SLIRP-209ENST00000557342 ATP5A1P25705 553 aaKnown RBP11.74□□□□□ -0.53
SLIRP-209ENST00000557342 CDH13P55290 713 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 LIM2P55344 173 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 HSD17B7P56937 341 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 OR4D2P58180 307 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 Q0VFX4 171 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 EXT1Q16394 746 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 UNC50Q53HI1 259 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 SFT2D3Q587I9 215 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 CRB2Q5IJ48 1285 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 PLAG1Q6DJT9 500 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 OR4C11Q6IEV9 310 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 IGFL3Q6UXB1 125 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 ZYG11AQ6WRX3 759 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 PRICKLE2Q7Z3G6 844 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 UBE3DQ7Z6J8 389 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 TRABD2AQ86V40 505 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 ZNF595Q8IYB9 648 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 SHISA5Q8N114 240 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 C4orf33Q8N1A6 199 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 ZADH2Q8N4Q0 377 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 ACOT4Q8N9L9 421 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 CCDC63Q8NA47 563 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 TRPC4APQ8TEL6 797 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 IMMP1LQ96LU5 166 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 TMEM237Q96Q45 408 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 ZNF382Q96SR6 550 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 SERPINI1Q99574 410 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 MESP1Q9BRJ9 268 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 TMEM109Q9BVC6 243 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 IQCGQ9H095 443 aaKnown RBP11.74□□□□□ -0.53
SLIRP-209ENST00000557342 ELOVL6Q9H5J4 265 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 EPS8L2Q9H6S3 715 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 PRTFDC1Q9NRG1 225 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 MKS1Q9NXB0 559 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms