RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 SCYL1Q96KG9 808 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 RASL10BQ96S79 203 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 FAM173AQ9BQD7 235 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 AARSD1Q9BTE6 412 aaKnown RBP11.61□□□□□ -0.55
PSEN1-221ENST00000557293 PCBD2Q9H0N5 130 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 BEX4Q9NWD9 120 aaPredicted RBP11.61□□□□□ -0.55
PSEN1-221ENST00000557293 HPF1Q9NWY4 346 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 SYBUQ9NX95 663 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 TUBA8Q9NY65 449 aaPredicted RBP11.61□□□□□ -0.55
PSEN1-221ENST00000557293 MYOTQ9UBF9 498 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 KIAA1549Q9HCM3 1950 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 TRBC2A0A5B9 178 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 HSPB2A8KAH6 182 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 FAM171A2A8MVW0 826 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 BTNL10A8MVZ5 291 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 WWP2O00308 870 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 CBFA2T2O43439 604 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 HRGP04196 525 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 RFPL3SP0C7P2 107 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 RNH1P13489 461 aaKnown RBP11.6□□□□□ -0.55
PSEN1-221ENST00000557293 ENO3P13929 434 aaPredicted RBP11.6□□□□□ -0.55
PSEN1-221ENST00000557293 GABRA1P14867 456 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 HNRNPFP52597 415 aaKnown RBP11.6□□□□□ -0.55
PSEN1-221ENST00000557293 WNT3P56703 355 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 RAB8AP61006 207 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 RUNX2Q13950 521 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 HSPB2Q16082 182 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 KIAA0930Q6ICG6 404 aaPredicted RBP11.6□□□□□ -0.55
PSEN1-221ENST00000557293 NEPROQ6NW34 567 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 ADGRD1Q6QNK2 874 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 STRA8Q7Z7C7 330 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 CCDC170Q8IYT3 715 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 ULK2Q8IYT8 1036 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 ANKRD53Q8N9V6 530 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 TMEM52Q8NDY8 209 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 CD200R1Q8TD46 325 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 C1orf54Q8WWF1 131 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 SREK1Q8WXA9 508 aaKnown RBP11.6□□□□□ -0.55
PSEN1-221ENST00000557293 SARAFQ96BY9 339 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 CALR3Q96L12 384 aaKnown RBP11.6□□□□□ -0.55
PSEN1-221ENST00000557293 OR4K3Q96R72 315 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 GPR21Q99679 349 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 RHBGQ9H310 441 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 EIF2B3Q9NR50 452 aaKnown RBP11.6□□□□□ -0.55
PSEN1-221ENST00000557293 PNO1Q9NRX1 252 aaKnown RBP11.6□□□□□ -0.55
PSEN1-221ENST00000557293 BFARQ9NZS9 450 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 SOX13Q9UN79 622 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 STAB1Q9NY15 2570 aa11.6□□□□□ -0.55
PSEN1-221ENST00000557293 ATRQ13535 2644 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 TRGV5A0A0B4J1U4 118 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 INAFM1C9JVW0 142 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 H7C1Q1 480 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 HCN1O60741 890 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 CCL3P10147 92 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 BMP5P22003 454 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 SCTRP47872 440 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 HK2P52789 917 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 SPA17Q15506 151 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 TTLL9Q3SXZ7 439 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 CATSPEREQ5SY80 951 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 GK5Q6ZS86 529 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 SLC13A5Q86YT5 568 aaPredicted RBP11.59□□□□□ -0.55
PSEN1-221ENST00000557293 DENND6AQ8IWF6 608 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 CPNE9Q8IYJ1 553 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 ZNF321PQ8N8H1 164 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 ASB15Q8WXK1 588 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 KCNJ9Q92806 393 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 KIAA1191Q96A73 305 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 ALKBH8Q96BT7 664 aaKnown RBP11.59□□□□□ -0.55
PSEN1-221ENST00000557293 CAPZA3Q96KX2 299 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 PROK2Q9HC23 129 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 INTS10Q9NVR2 710 aaKnown RBP11.59□□□□□ -0.55
PSEN1-221ENST00000557293 PAK5Q9P286 719 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 ZFP69BQ9UJL9 534 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 AMFRQ9UKV5 643 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 ZNF148Q9UQR1 794 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 ATG4BQ9Y4P1 393 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 MMACHCQ9Y4U1 282 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 PCDHGB3Q9Y5G1 929 aa11.59□□□□□ -0.55
PSEN1-221ENST00000557293 EPN1Q9Y6I3 576 aaPredicted RBP11.59□□□□□ -0.55
PSEN1-221ENST00000557293 NCKAP5O14513 1909 aa11.58□□□□□ -0.55
PSEN1-221ENST00000557293 TLN2Q9Y4G6 2542 aa11.58□□□□□ -0.56
PSEN1-221ENST00000557293 TCRBV7S3A2A0A539 114 aa11.58□□□□□ -0.56
PSEN1-221ENST00000557293 TUBAL3A6NHL2 446 aa11.58□□□□□ -0.56
PSEN1-221ENST00000557293 FAM47E-STBD1D6RA91 191 aa11.58□□□□□ -0.56
PSEN1-221ENST00000557293 EPPINO95925 133 aa11.58□□□□□ -0.56
PSEN1-221ENST00000557293 SERPIND1P05546 499 aa11.58□□□□□ -0.56
PSEN1-221ENST00000557293 GRK3P35626 688 aa11.58□□□□□ -0.56
PSEN1-221ENST00000557293 PIGAP37287 484 aa11.58□□□□□ -0.56
PSEN1-221ENST00000557293 HNF4AP41235 474 aa11.58□□□□□ -0.56
PSEN1-221ENST00000557293 CCR8P51685 355 aa11.58□□□□□ -0.56
PSEN1-221ENST00000557293 ZNF136P52737 540 aa11.58□□□□□ -0.56
PSEN1-221ENST00000557293 NAP1L1P55209 391 aaKnown RBP11.58□□□□□ -0.56
PSEN1-221ENST00000557293 CTBP1Q13363 440 aa11.58□□□□□ -0.56
PSEN1-221ENST00000557293 SNX1Q13596 522 aa11.58□□□□□ -0.56
PSEN1-221ENST00000557293 PCBP2Q15366 365 aaKnown RBP eCLIP11.58□□□□□ -0.56
PSEN1-221ENST00000557293 PHKG1Q16816 387 aa11.58□□□□□ -0.56
PSEN1-221ENST00000557293 KCTD19Q17RG1 926 aaPredicted RBP11.58□□□□□ -0.56
PSEN1-221ENST00000557293 HECTD2Q5U5R9 776 aa11.58□□□□□ -0.56
PSEN1-221ENST00000557293 NIPAL1Q6NVV3 410 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms