RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 RAB38P57729 211 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 AP2B1P63010 937 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 KLRB1Q12918 225 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 TRAF3Q13114 568 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 CUL3Q13618 768 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 RCN2Q14257 317 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 ABRAXAS2Q15018 415 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 IRAK1BP1Q5VVH5 260 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 OR4C11Q6IEV9 310 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 ZYG11AQ6WRX3 759 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 RPS27LQ71UM5 84 aaKnown RBP10.06□□□□□ -0.8
LINC00239-201ENST00000556973 UBE3DQ7Z6J8 389 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 ANKRD37Q7Z713 158 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 TRABD2AQ86V40 505 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 PTRH1Q86Y79 214 aaKnown RBP10.06□□□□□ -0.8
LINC00239-201ENST00000556973 PARP9Q8IXQ6 854 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 C4orf33Q8N1A6 199 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 ACOT4Q8N9L9 421 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 CCDC63Q8NA47 563 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 TEX19Q8NA77 164 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 TRPC4APQ8TEL6 797 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 MTFMTQ96DP5 389 aaKnown RBP10.06□□□□□ -0.8
LINC00239-201ENST00000556973 THOC3Q96J01 351 aaKnown RBP10.06□□□□□ -0.8
LINC00239-201ENST00000556973 IMMP1LQ96LU5 166 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 TMEM237Q96Q45 408 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 MESP1Q9BRJ9 268 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 TUBB6Q9BUF5 446 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 RBCK1Q9BYM8 510 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 LHPPQ9H008 270 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 OR51B5Q9H339 312 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 ZNF552Q9H707 407 aaPredicted RBP10.06□□□□□ -0.8
LINC00239-201ENST00000556973 LYRM4Q9HD34 91 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 DMRT3Q9NQL9 472 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 PRDM9Q9NQV7 894 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 RIC8BQ9NVN3 520 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 MKS1Q9NXB0 559 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 TRPS1Q9UHF7 1281 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 MID2Q9UJV3 735 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 ANAPC2Q9UJX6 822 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 PPT2Q9UMR5 302 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 DAPP1Q9UN19 280 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 SNX6Q9UNH7 406 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 MRPS33Q9Y291 106 aaKnown RBP10.06□□□□□ -0.8
LINC00239-201ENST00000556973 MED13Q9UHV7 2174 aa10.06□□□□□ -0.8
LINC00239-201ENST00000556973 IGSF10Q6WRI0 2623 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 BLACEA4D250 179 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 SYNDIG1LA6NDD5 238 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 SAP18O00422 153 aaKnown RBP10.05□□□□□ -0.8
LINC00239-201ENST00000556973 PPP6CO00743 305 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 SUV39H1O43463 412 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 SH3BGRLO75368 114 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 SCELO95171 688 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 PDGFAP04085 211 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 SERPINA7P05543 415 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 TSPAN8P19075 237 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 NR1D1P20393 614 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 HIST1H1TP22492 207 aaPredicted RBP10.05□□□□□ -0.8
LINC00239-201ENST00000556973 NEK2P51955 445 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 RAP1GDS1P52306 607 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 HSD17B7P56937 341 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 DNAJB13P59910 316 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 RPS13P62277 151 aaKnown RBP10.05□□□□□ -0.8
LINC00239-201ENST00000556973 BTG2P78543 158 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 EEF1A2Q05639 463 aaKnown RBP10.05□□□□□ -0.8
LINC00239-201ENST00000556973 ACTN3Q08043 901 aaPredicted RBP10.05□□□□□ -0.8
LINC00239-201ENST00000556973 Q0VFX4 171 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 IFT88Q13099 833 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 RAPSNQ13702 412 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 PCOLCEQ15113 449 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 VWA5B1Q5TIE3 1220 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 AGAP7PQ5VUJ5 663 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 FRG2Q64ET8 278 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 JMJD6Q6NYC1 403 aaPredicted RBP10.05□□□□□ -0.8
LINC00239-201ENST00000556973 RIPOR1Q6ZS17 1223 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 LANCL3Q6ZV70 420 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 CROCCP2Q86T23 111 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 ZNF605Q86T29 641 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 ZNF595Q8IYB9 648 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 IQCKQ8N0W5 287 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 RNF175Q8N4F7 328 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 BANPQ8N9N5 519 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 C7orf57Q8NEG2 295 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 ARMC2Q8NEN0 867 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 PTCHD1Q96NR3 888 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 AGAP4Q96P64 663 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 FRG2BQ96QU4 278 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 SMC6Q96SB8 1091 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 SERPINI1Q99574 410 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 IQCGQ9H095 443 aaKnown RBP10.05□□□□□ -0.8
LINC00239-201ENST00000556973 ELOVL6Q9H5J4 265 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 OXSMQ9NWU1 459 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 AHSPQ9NZD4 102 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 KCMF1Q9P0J7 381 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 PLLPQ9Y342 182 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 MMACHCQ9Y4U1 282 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 HEMK1Q9Y5R4 338 aaPredicted RBP10.05□□□□□ -0.8
LINC00239-201ENST00000556973 SPACA6W5XKT8 324 aa10.05□□□□□ -0.8
LINC00239-201ENST00000556973 FAM208BQ5VWN6 2430 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 CHD6Q8TD26 2715 aa10.04□□□□□ -0.8
LINC00239-201ENST00000556973 A0A1B0GTL3 188 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms