RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 TCEANCQ8N8B7 351 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 UBTD2Q8WUN7 234 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 HPSE2Q8WWQ2 592 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 FCAMRQ8WWV6 532 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 DYRK2Q92630 601 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 NXPE2Q96DL1 559 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 GIMAP5Q96F15 307 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 ALG14Q96F25 216 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 C14orf79Q96F83 325 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 EGLN3Q9H6Z9 239 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 KCNMB3Q9NPA1 279 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 HACD3Q9P035 362 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 DBF4Q9UBU7 674 aaPredicted RBP3.84□□□□□ -1.79
PRPF39-210ENST00000556718 SH3BGRL2Q9UJC5 107 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 MMP24Q9Y5R2 645 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 CLCA3PQ9Y6N3 262 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 AP1M2Q9Y6Q5 423 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 A0A087WUV0 522 aaPredicted RBP3.83□□□□□ -1.8
PRPF39-210ENST00000556718 A0A1B0GVY2 172 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 RGSL1A5PLK6 1076 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 ZNF732B4DXR9 585 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 TCP10L2B9ZVM9 353 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 SLC1A7O00341 560 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 CHEK1O14757 476 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 SLC22A2O15244 555 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 OGTO15294 1046 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 OR6B1O95007 311 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 CLPTM1O96005 669 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 SERPINF2P08697 491 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 NUDT17P0C025 328 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 SKILP12757 684 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 CCND2P30279 289 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 SLC6A12P48065 614 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 TNFSF10P50591 281 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 ZNF131P52739 623 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 GEMP55040 296 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 SP3Q02447 781 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 GABPAQ06546 454 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 P2RY6Q15077 328 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 ZNF74Q16587 644 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 KIAA1644Q3SXP7 199 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 GTDC1Q4AE62 458 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 ZNF776Q68DI1 518 aaPredicted RBP3.83□□□□□ -1.8
PRPF39-210ENST00000556718 RAET1GQ6H3X3 334 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 OR4C11Q6IEV9 310 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 C19orf48Q6RUI8 117 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 C17orf107Q6ZR85 190 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 RFPL4BQ6ZWI9 263 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 CYP4V2Q6ZWL3 525 aaPredicted RBP3.83□□□□□ -1.8
PRPF39-210ENST00000556718 SLC26A9Q7LBE3 791 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 TRPV3Q8NET8 790 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 OR13C5Q8NGS8 318 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 OR4C3Q8NH37 302 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 OR1L3Q8NH93 324 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 ARHGAP45Q92619 1136 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 BPIFA2Q96DR5 249 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 ZNF274Q96GC6 653 aaPredicted RBP3.83□□□□□ -1.8
PRPF39-210ENST00000556718 SAMD8Q96LT4 415 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 PCDHB18PQ96TA0 734 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 ZNF577Q9BSK1 485 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 NACA2Q9H009 215 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 GANQ9H2C0 597 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 DPH5Q9H2P9 285 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 SIX2Q9NPC8 291 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 NGBQ9NPG2 151 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 ZFP57Q9NU63 452 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 NDUFA13Q9P0J0 144 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 FAM153AQ9UHL3 310 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 NARFQ9UHQ1 456 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 PSORS1C1Q9UIG5 152 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 PLA2G4CQ9UP65 541 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 PLEKHA6Q9Y2H5 1048 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 MRPS2Q9Y399 296 aaKnown RBP3.83□□□□□ -1.8
PRPF39-210ENST00000556718 ETV7Q9Y603 341 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 RNF123Q5XPI4 1314 aa3.83□□□□□ -1.8
PRPF39-210ENST00000556718 ATP8B3O60423 1300 aa3.82□□□□□ -1.8
PRPF39-210ENST00000556718 UMODL1Q5DID0 1318 aa3.82□□□□□ -1.8
PRPF39-210ENST00000556718 TRBV4-1A0A0J9YWV2 114 aa3.82□□□□□ -1.8
PRPF39-210ENST00000556718 NKX6-3A6NJ46 265 aa3.82□□□□□ -1.8
PRPF39-210ENST00000556718 SMIM1B2RUZ4 78 aa3.82□□□□□ -1.8
PRPF39-210ENST00000556718 P2RY10O00398 339 aa3.82□□□□□ -1.8
PRPF39-210ENST00000556718 STBD1O95210 358 aa3.82□□□□□ -1.8
PRPF39-210ENST00000556718 NGFP01138 241 aa3.82□□□□□ -1.8
PRPF39-210ENST00000556718 CXCL10P02778 98 aa3.82□□□□□ -1.8
PRPF39-210ENST00000556718 HEXBP07686 556 aa3.82□□□□□ -1.8
PRPF39-210ENST00000556718 RPL35AP18077 110 aaKnown RBP3.82□□□□□ -1.8
PRPF39-210ENST00000556718 CHRNA3P32297 505 aa3.82□□□□□ -1.8
PRPF39-210ENST00000556718 ALDH3B1P43353 468 aa3.82□□□□□ -1.8
PRPF39-210ENST00000556718 PITPNBP48739 271 aa3.82□□□□□ -1.8
PRPF39-210ENST00000556718 PHEXP78562 749 aa3.82□□□□□ -1.8
PRPF39-210ENST00000556718 SPHARQ15513 63 aa3.82□□□□□ -1.8
PRPF39-210ENST00000556718 TEAD2Q15562 447 aa3.82□□□□□ -1.8
PRPF39-210ENST00000556718 EXT1Q16394 746 aa3.82□□□□□ -1.8
PRPF39-210ENST00000556718 LRRC37A5PQ49AS3 106 aa3.82□□□□□ -1.8
PRPF39-210ENST00000556718 LYPLAL1Q5VWZ2 237 aa3.82□□□□□ -1.8
PRPF39-210ENST00000556718 ADAM5Q6NVV9 412 aa3.82□□□□□ -1.8
PRPF39-210ENST00000556718 IRGCQ6NXR0 463 aa3.82□□□□□ -1.8
PRPF39-210ENST00000556718 OLFM4Q6UX06 510 aa3.82□□□□□ -1.8
PRPF39-210ENST00000556718 CEACAM20Q6UY09 585 aa3.82□□□□□ -1.8
PRPF39-210ENST00000556718 SMIM29Q86T20 159 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms