RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 COMMD10Q9Y6G5 202 aa9.41□□□□□ -0.9
SCFD1-220ENST00000556486 SCN2AQ99250 2005 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 ZCWPW2A0A1B0GU75 182 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 E5RI56 91 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 HAT1O14929 419 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 TTI1O43156 1089 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 ZBTB14O43829 449 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 STATHP02808 62 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 IMPA1P29218 277 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 PTGER1P34995 402 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 RFC3P40938 356 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 AVPR1BP47901 424 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 AGTR2P50052 363 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 RPS15AP62244 130 aaKnown RBP9.4□□□□□ -0.9
SCFD1-220ENST00000556486 LTBQ06643 244 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 PTK6Q13882 451 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 LONRF1Q17RB8 773 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 ZNF470Q6ECI4 717 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 SPINK14Q6IE38 97 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 LRRC8EQ6NSJ5 796 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 ZNF549Q6P9A3 640 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 TAOK1Q7L7X3 1001 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 GSTA5Q7RTV2 222 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.4□□□□□ -0.9
SCFD1-220ENST00000556486 CHERPQ8IWX8 916 aaKnown RBP9.4□□□□□ -0.9
SCFD1-220ENST00000556486 LGI4Q8N135 537 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 RPRMLQ8N4K4 120 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 MARVELD2Q8N4S9 558 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 PRELID2Q8N945 189 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 MCUQ8NE86 351 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 FAM136AQ96C01 138 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 TM4SF19Q96DZ7 209 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 DMRTA2Q96SC8 542 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 CYTH2Q99418 400 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 TREX2Q9BQ50 279 aaPredicted RBP9.4□□□□□ -0.9
SCFD1-220ENST00000556486 SARGQ9BW04 601 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 PCBD2Q9H0N5 130 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 XAB2Q9HCS7 855 aaKnown RBP9.4□□□□□ -0.9
SCFD1-220ENST00000556486 TMEM184CQ9NVA4 438 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 C19orf25Q9UFG5 118 aaPredicted RBP9.4□□□□□ -0.9
SCFD1-220ENST00000556486 SPEF1Q9Y4P9 236 aa9.4□□□□□ -0.9
SCFD1-220ENST00000556486 ASPDHA6ND91 283 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 OR2W5A6NFC9 320 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 SDR42E2A6NKP2 422 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 KIAA1324LA8MWY0 1029 aaPredicted RBP9.39□□□□□ -0.91
SCFD1-220ENST00000556486 H7BY64 318 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 ASNA1O43681 348 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 AVILO75366 819 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 ZWINTO95229 277 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 IL10P22301 178 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 EEF1DP29692 281 aaKnown RBP9.39□□□□□ -0.91
SCFD1-220ENST00000556486 CD96P40200 585 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 BCL6P41182 706 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 KCNJ1P48048 391 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 SNRPNP63162 240 aaKnown RBP9.39□□□□□ -0.91
SCFD1-220ENST00000556486 MAT1AQ00266 395 aaKnown RBP9.39□□□□□ -0.91
SCFD1-220ENST00000556486 TUBA3CQ13748 450 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 DHX34Q14147 1143 aaKnown RBP9.39□□□□□ -0.91
SCFD1-220ENST00000556486 OR1C1Q15619 314 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 SLC35F1Q5T1Q4 408 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 MFSD4BQ5TF39 518 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 TUBA3EQ6PEY2 450 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 LANCL3Q6ZV70 420 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 GALNTL5Q7Z4T8 443 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 CPEB2Q7Z5Q1 589 aaKnown RBP9.39□□□□□ -0.91
SCFD1-220ENST00000556486 CD163Q86VB7 1156 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 GAS2L3Q86XJ1 694 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 CCDC71Q8IV32 467 aaPredicted RBP9.39□□□□□ -0.91
SCFD1-220ENST00000556486 PPFIBP2Q8ND30 876 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 MDS2Q8NDY4 140 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 CHDHQ8NE62 594 aaPredicted RBP9.39□□□□□ -0.91
SCFD1-220ENST00000556486 TRIM58Q8NG06 486 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 OR9A4Q8NGU2 314 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 CD200R1Q8TD46 325 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 METTL21AQ8WXB1 218 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 C1orf159Q96HA4 380 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 PRAP1Q96NZ9 151 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 TRIM51Q9BSJ1 452 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 MMP25Q9NPA2 562 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 CCDC177Q9NQR7 707 aaPredicted RBP9.39□□□□□ -0.91
SCFD1-220ENST00000556486 COQ3Q9NZJ6 369 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 SAMD15Q9P1V8 674 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 PLEKHA6Q9Y2H5 1048 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 SLC22A7Q9Y694 548 aa9.39□□□□□ -0.91
SCFD1-220ENST00000556486 E9PLN8 166 aa9.38□□□□□ -0.91
SCFD1-220ENST00000556486 AQP7O14520 342 aa9.38□□□□□ -0.91
SCFD1-220ENST00000556486 FAM155BO75949 473 aa9.38□□□□□ -0.91
SCFD1-220ENST00000556486 TSPAN12O95859 305 aa9.38□□□□□ -0.91
SCFD1-220ENST00000556486 SCG5P05408 212 aa9.38□□□□□ -0.91
SCFD1-220ENST00000556486 TPOP07202 933 aa9.38□□□□□ -0.91
SCFD1-220ENST00000556486 IGFBP2P18065 325 aa9.38□□□□□ -0.91
SCFD1-220ENST00000556486 CCND1P24385 295 aa9.38□□□□□ -0.91
SCFD1-220ENST00000556486 ECI1P42126 302 aa9.38□□□□□ -0.91
SCFD1-220ENST00000556486 SLC1A2P43004 574 aa9.38□□□□□ -0.91
SCFD1-220ENST00000556486 NR0B1P51843 470 aaKnown RBP9.38□□□□□ -0.91
SCFD1-220ENST00000556486 TBPL1P62380 186 aa9.38□□□□□ -0.91
SCFD1-220ENST00000556486 TFF3Q07654 80 aa9.38□□□□□ -0.91
SCFD1-220ENST00000556486 SP140Q13342 867 aa9.38□□□□□ -0.91
SCFD1-220ENST00000556486 EXT1Q16394 746 aa9.38□□□□□ -0.91
SCFD1-220ENST00000556486 BTBD16Q32M84 506 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms