RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 CD1DP15813 335 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 STMN1P16949 149 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 ZNF10P21506 573 aaPredicted RBP21.1■□□□□ 0.97
ACTN1-220ENST00000556433 TNFRSF8P28908 595 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 HSD17B7P56937 341 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 RAB38P57729 211 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 ATP6V0D1P61421 351 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 ADORA2A-AS1P86434 159 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 SLC13A2Q13183 592 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 RNFT1Q5M7Z0 435 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 CDKL4Q5MAI5 379 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 Q6ZPB1 254 aaPredicted RBP21.1■□□□□ 0.97
ACTN1-220ENST00000556433 C3orf62Q6ZUJ4 267 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 MAATS1Q7Z4T9 603 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 SCUBE1Q8IWY4 988 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 MCEMP1Q8IX19 187 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 ARMC10Q8N2F6 343 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 APCDD1LQ8NCL9 501 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 OR2L5Q8NG80 312 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 ADAMTS18Q8TE60 1221 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 QRFPRQ96P65 431 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 GPR22Q99680 433 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 CPNE1Q99829 537 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 REXO4Q9GZR2 422 aaKnown RBP21.1■□□□□ 0.97
ACTN1-220ENST00000556433 EHD1Q9H4M9 534 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 CHST11Q9NPF2 352 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 ZNF490Q9ULM2 529 aaPredicted RBP21.1■□□□□ 0.97
ACTN1-220ENST00000556433 TCRBV9S1A1TA0A576 114 aa21.09■□□□□ 0.97
ACTN1-220ENST00000556433 ZNHIT1O43257 154 aa21.09■□□□□ 0.97
ACTN1-220ENST00000556433 PRAMEF4O60810 478 aa21.09■□□□□ 0.97
ACTN1-220ENST00000556433 ZNF24P17028 368 aa21.09■□□□□ 0.97
ACTN1-220ENST00000556433 PPP2R1BP30154 601 aa21.09■□□□□ 0.97
ACTN1-220ENST00000556433 HPDP32754 393 aaPredicted RBP21.09■□□□□ 0.97
ACTN1-220ENST00000556433 GP5P40197 560 aa21.09■□□□□ 0.97
ACTN1-220ENST00000556433 HNRNPFP52597 415 aaKnown RBP21.09■□□□□ 0.97
ACTN1-220ENST00000556433 SMSP52788 366 aa21.09■□□□□ 0.97
ACTN1-220ENST00000556433 TERF2Q15554 542 aa21.09■□□□□ 0.97
ACTN1-220ENST00000556433 OR4D1Q15615 310 aa21.09■□□□□ 0.97
ACTN1-220ENST00000556433 ZNF630Q2M218 657 aaPredicted RBP21.09■□□□□ 0.97
ACTN1-220ENST00000556433 XKR6Q5GH73 641 aa21.09■□□□□ 0.97
ACTN1-220ENST00000556433 PRAMEF9Q5VWM5 478 aa21.09■□□□□ 0.97
ACTN1-220ENST00000556433 TRIM40Q6P9F5 258 aa21.09■□□□□ 0.97
ACTN1-220ENST00000556433 CYS1Q717R9 158 aa21.09■□□□□ 0.97
ACTN1-220ENST00000556433 VN1R5Q7Z5H4 357 aa21.09■□□□□ 0.97
ACTN1-220ENST00000556433 GHDCQ8N2G8 530 aa21.09■□□□□ 0.97
ACTN1-220ENST00000556433 TMEM52Q8NDY8 209 aa21.09■□□□□ 0.97
ACTN1-220ENST00000556433 ANP32BQ92688 251 aaKnown RBP21.09■□□□□ 0.97
ACTN1-220ENST00000556433 RBBP8Q99708 897 aa21.09■□□□□ 0.97
ACTN1-220ENST00000556433 CD274Q9NZQ7 290 aa21.09■□□□□ 0.97
ACTN1-220ENST00000556433 MRPS33Q9Y291 106 aaKnown RBP21.09■□□□□ 0.97
ACTN1-220ENST00000556433 RAD51CO43502 376 aa21.08■□□□□ 0.97
ACTN1-220ENST00000556433 TBX6O95947 436 aaPredicted RBP21.08■□□□□ 0.97
ACTN1-220ENST00000556433 ABOP16442 354 aa21.08■□□□□ 0.97
ACTN1-220ENST00000556433 HSF1Q00613 529 aa21.08■□□□□ 0.97
ACTN1-220ENST00000556433 DOC2AQ14183 400 aa21.08■□□□□ 0.97
ACTN1-220ENST00000556433 ADPRMQ3LIE5 342 aa21.08■□□□□ 0.97
ACTN1-220ENST00000556433 ADNP2Q6IQ32 1131 aa21.08■□□□□ 0.97
ACTN1-220ENST00000556433 ABHD17CQ6PCB6 329 aa21.08■□□□□ 0.97
ACTN1-220ENST00000556433 CTAGE3PQ8IX95 158 aa21.08■□□□□ 0.97
ACTN1-220ENST00000556433 ZNF595Q8IYB9 648 aa21.08■□□□□ 0.97
ACTN1-220ENST00000556433 TMEM156Q8N614 296 aa21.08■□□□□ 0.97
ACTN1-220ENST00000556433 FAM47BQ8NA70 645 aa21.08■□□□□ 0.97
ACTN1-220ENST00000556433 SPATA4Q8NEY3 305 aa21.08■□□□□ 0.97
ACTN1-220ENST00000556433 NCLNQ969V3 563 aa21.08■□□□□ 0.97
ACTN1-220ENST00000556433 PTCD3Q96EY7 689 aaKnown RBP21.08■□□□□ 0.97
ACTN1-220ENST00000556433 VMP1Q96GC9 406 aa21.08■□□□□ 0.97
ACTN1-220ENST00000556433 SERINC2Q96SA4 455 aa21.08■□□□□ 0.97
ACTN1-220ENST00000556433 CCDC77Q9BR77 488 aa21.08■□□□□ 0.97
ACTN1-220ENST00000556433 PTBP2Q9UKA9 531 aaKnown RBP21.08■□□□□ 0.97
ACTN1-220ENST00000556433 PPIEQ9UNP9 301 aaKnown RBP21.08■□□□□ 0.97
ACTN1-220ENST00000556433 KLF13Q9Y2Y9 288 aaPredicted RBP21.08■□□□□ 0.97
ACTN1-220ENST00000556433 MEMO1Q9Y316 297 aa21.08■□□□□ 0.97
ACTN1-220ENST00000556433 CLDN16Q9Y5I7 305 aa21.08■□□□□ 0.97
ACTN1-220ENST00000556433 FAM159BA6NKW6 160 aa21.07■□□□□ 0.96
ACTN1-220ENST00000556433 TGFBR3LH3BV60 316 aa21.07■□□□□ 0.96
ACTN1-220ENST00000556433 ITGA10O75578 1167 aa21.07■□□□□ 0.96
ACTN1-220ENST00000556433 S100BP04271 92 aaPredicted RBP21.07■□□□□ 0.96
ACTN1-220ENST00000556433 MEOX1P50221 254 aa21.07■□□□□ 0.96
ACTN1-220ENST00000556433 MTTPP55157 894 aa21.07■□□□□ 0.96
ACTN1-220ENST00000556433 LIM2P55344 173 aa21.07■□□□□ 0.96
ACTN1-220ENST00000556433 PDK4Q16654 411 aa21.07■□□□□ 0.96
ACTN1-220ENST00000556433 HIST2H2ACQ16777 129 aaPredicted RBP21.07■□□□□ 0.96
ACTN1-220ENST00000556433 HIST2H2AA3Q6FI13 130 aa21.07■□□□□ 0.96
ACTN1-220ENST00000556433 CLNKQ7Z7G1 428 aa21.07■□□□□ 0.96
ACTN1-220ENST00000556433 SULF2Q8IWU5 870 aa21.07■□□□□ 0.96
ACTN1-220ENST00000556433 POGLUT1Q8NBL1 392 aa21.07■□□□□ 0.96
ACTN1-220ENST00000556433 KIAA1191Q96A73 305 aa21.07■□□□□ 0.96
ACTN1-220ENST00000556433 WDR34Q96EX3 536 aa21.07■□□□□ 0.96
ACTN1-220ENST00000556433 UBXN10Q96LJ8 280 aa21.07■□□□□ 0.96
ACTN1-220ENST00000556433 F2RL3Q96RI0 385 aa21.07■□□□□ 0.96
ACTN1-220ENST00000556433 EFCAB11Q9BUY7 163 aa21.07■□□□□ 0.96
ACTN1-220ENST00000556433 COPS7BQ9H9Q2 264 aaPredicted RBP21.07■□□□□ 0.96
ACTN1-220ENST00000556433 GRHL1Q9NZI5 618 aa21.07■□□□□ 0.96
ACTN1-220ENST00000556433 ZNF223Q9UK11 482 aaPredicted RBP21.07■□□□□ 0.96
ACTN1-220ENST00000556433 RNF112Q9ULX5 631 aa21.07■□□□□ 0.96
ACTN1-220ENST00000556433 KLRC4-KLRK1H3BQV0 150 aa21.06■□□□□ 0.96
ACTN1-220ENST00000556433 CYR61O00622 381 aa21.06■□□□□ 0.96
ACTN1-220ENST00000556433 CCNT2O60583 730 aaKnown RBP21.06■□□□□ 0.96
ACTN1-220ENST00000556433 ZFAND5O76080 213 aa21.06■□□□□ 0.96
ACTN1-220ENST00000556433 SNRPB2P08579 225 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms