RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 YIPF4Q9BSR8 244 aa12.92□□□□□ -0.34
ACTN1-219ENST00000556432 KIFC1Q9BW19 673 aa12.92□□□□□ -0.34
ACTN1-219ENST00000556432 IL1RL2Q9HB29 575 aa12.92□□□□□ -0.34
ACTN1-219ENST00000556432 INTS10Q9NVR2 710 aaKnown RBP12.92□□□□□ -0.34
ACTN1-219ENST00000556432 ZNF223Q9UK11 482 aaPredicted RBP12.92□□□□□ -0.34
ACTN1-219ENST00000556432 VPS13CQ709C8 3753 aa12.92□□□□□ -0.34
ACTN1-219ENST00000556432 TRGV5A0A0B4J1U4 118 aa12.91□□□□□ -0.34
ACTN1-219ENST00000556432 A0A1B0GVC2 190 aa12.91□□□□□ -0.34
ACTN1-219ENST00000556432 MIF4GDA9UHW6 222 aaKnown RBP12.91□□□□□ -0.34
ACTN1-219ENST00000556432 SMAD7O15105 426 aaKnown RBP12.91□□□□□ -0.34
ACTN1-219ENST00000556432 PRKNO60260 465 aaPredicted RBP12.91□□□□□ -0.34
ACTN1-219ENST00000556432 SUSD5O60279 629 aa12.91□□□□□ -0.34
ACTN1-219ENST00000556432 FTCDO95954 541 aa12.91□□□□□ -0.34
ACTN1-219ENST00000556432 P04436 131 aa12.91□□□□□ -0.34
ACTN1-219ENST00000556432 ZSCAN5DPP0CG00 497 aa12.91□□□□□ -0.34
ACTN1-219ENST00000556432 PAMP19021 973 aa12.91□□□□□ -0.34
ACTN1-219ENST00000556432 CNR1P21554 472 aa12.91□□□□□ -0.34
ACTN1-219ENST00000556432 CCND1P24385 295 aa12.91□□□□□ -0.34
ACTN1-219ENST00000556432 DNASE1L1P49184 302 aa12.91□□□□□ -0.34
ACTN1-219ENST00000556432 TERF2Q15554 542 aa12.91□□□□□ -0.34
ACTN1-219ENST00000556432 OASLQ15646 514 aaKnown RBP12.91□□□□□ -0.34
ACTN1-219ENST00000556432 PHKG1Q16816 387 aa12.91□□□□□ -0.34
ACTN1-219ENST00000556432 XKR6Q5GH73 641 aa12.91□□□□□ -0.34
ACTN1-219ENST00000556432 NEPROQ6NW34 567 aa12.91□□□□□ -0.34
ACTN1-219ENST00000556432 CASC4Q6P4E1 433 aa12.91□□□□□ -0.34
ACTN1-219ENST00000556432 RTL4Q6ZR62 310 aa12.91□□□□□ -0.34
ACTN1-219ENST00000556432 CENPUQ71F23 418 aa12.91□□□□□ -0.34
ACTN1-219ENST00000556432 SLC13A5Q86YT5 568 aaPredicted RBP12.91□□□□□ -0.34
ACTN1-219ENST00000556432 P3H2Q8IVL5 708 aa12.91□□□□□ -0.34
ACTN1-219ENST00000556432 KCNJ9Q92806 393 aa12.91□□□□□ -0.34
ACTN1-219ENST00000556432 CAPZA3Q96KX2 299 aa12.91□□□□□ -0.34
ACTN1-219ENST00000556432 GPR21Q99679 349 aa12.91□□□□□ -0.34
ACTN1-219ENST00000556432 SH3GL2Q99962 352 aa12.91□□□□□ -0.34
ACTN1-219ENST00000556432 HAUS8Q9BT25 410 aa12.91□□□□□ -0.34
ACTN1-219ENST00000556432 EIF2B3Q9NR50 452 aaKnown RBP12.91□□□□□ -0.34
ACTN1-219ENST00000556432 BEX4Q9NWD9 120 aaPredicted RBP12.91□□□□□ -0.34
ACTN1-219ENST00000556432 MPDZO75970 2070 aa12.9□□□□□ -0.34
ACTN1-219ENST00000556432 TRBC2A0A5B9 178 aa12.9□□□□□ -0.34
ACTN1-219ENST00000556432 PABPN1LA6NDY0 278 aaKnown RBP12.9□□□□□ -0.34
ACTN1-219ENST00000556432 URADA6NGE7 173 aa12.9□□□□□ -0.34
ACTN1-219ENST00000556432 CLCA1A8K7I4 914 aa12.9□□□□□ -0.34
ACTN1-219ENST00000556432 H7C1Q1 480 aa12.9□□□□□ -0.34
ACTN1-219ENST00000556432 EPXP11678 715 aa12.9□□□□□ -0.34
ACTN1-219ENST00000556432 PPP2R1BP30154 601 aa12.9□□□□□ -0.34
ACTN1-219ENST00000556432 SLC13A2Q13183 592 aa12.9□□□□□ -0.34
ACTN1-219ENST00000556432 THOC5Q13769 683 aaKnown RBP12.9□□□□□ -0.34
ACTN1-219ENST00000556432 BMPR2Q13873 1038 aa12.9□□□□□ -0.34
ACTN1-219ENST00000556432 POU4F3Q15319 338 aa12.9□□□□□ -0.34
ACTN1-219ENST00000556432 Q5PR19 223 aa12.9□□□□□ -0.34
ACTN1-219ENST00000556432 KIAA0930Q6ICG6 404 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-219ENST00000556432 LCTLQ6UWM7 567 aa12.9□□□□□ -0.34
ACTN1-219ENST00000556432 CYHR1Q6ZMK1 362 aa12.9□□□□□ -0.34
ACTN1-219ENST00000556432 KIF18BQ86Y91 864 aa12.9□□□□□ -0.34
ACTN1-219ENST00000556432 KRTAP1-3Q8IUG1 177 aa12.9□□□□□ -0.34
ACTN1-219ENST00000556432 UTP15Q8TED0 518 aaKnown RBP12.9□□□□□ -0.34
ACTN1-219ENST00000556432 RASL10BQ96S79 203 aa12.9□□□□□ -0.34
ACTN1-219ENST00000556432 AARSD1Q9BTE6 412 aaKnown RBP12.9□□□□□ -0.34
ACTN1-219ENST00000556432 FRMD8P1Q9BZ68 369 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-219ENST00000556432 FBXO6Q9NRD1 293 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-219ENST00000556432 SACM1LQ9NTJ5 587 aa12.9□□□□□ -0.34
ACTN1-219ENST00000556432 KLHL42Q9P2K6 505 aa12.9□□□□□ -0.34
ACTN1-219ENST00000556432 MYOTQ9UBF9 498 aa12.9□□□□□ -0.34
ACTN1-219ENST00000556432 FOXD3Q9UJU5 478 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-219ENST00000556432 SOX13Q9UN79 622 aa12.9□□□□□ -0.34
ACTN1-219ENST00000556432 PDE10AQ9Y233 779 aa12.9□□□□□ -0.34
ACTN1-219ENST00000556432 DHRS7Q9Y394 339 aa12.9□□□□□ -0.34
ACTN1-219ENST00000556432 MMACHCQ9Y4U1 282 aa12.9□□□□□ -0.34
ACTN1-219ENST00000556432 HCN1O60741 890 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 IFNA16P05015 189 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 NPPBP16860 134 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 CD53P19397 219 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 RPL22P35268 128 aaKnown RBP12.89□□□□□ -0.35
ACTN1-219ENST00000556432 TERF1P54274 439 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 SEL1L2Q5TEA6 688 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 HSDL2Q6YN16 418 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 SYCE1Q8N0S2 351 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 FBXW8Q8N3Y1 598 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 TC2NQ8N9U0 490 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 ABHD11Q8NFV4 315 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 LINC01560Q8TB33 94 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 NT5CQ8TCD5 201 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 CD200R1Q8TD46 325 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 PYCR2Q96C36 320 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 SCYL1Q96KG9 808 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 COX4I2Q96KJ9 171 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 SGPP1Q9BX95 441 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 TSGA10Q9BZW7 698 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 PLEKHF2Q9H8W4 249 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 CLK4Q9HAZ1 481 aaKnown RBP12.89□□□□□ -0.35
ACTN1-219ENST00000556432 PRTFDC1Q9NRG1 225 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 TRMT1Q9NXH9 659 aaKnown RBP12.89□□□□□ -0.35
ACTN1-219ENST00000556432 TUBA8Q9NY65 449 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-219ENST00000556432 SPRR3Q9UBC9 169 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 ZFP69BQ9UJL9 534 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 ADAMTS6Q9UKP5 1117 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 CLCA3PQ9Y6N3 262 aa12.89□□□□□ -0.35
ACTN1-219ENST00000556432 BTNL10A8MVZ5 291 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 EEF1E1-BLOC1S5C9J1V9 151 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 CLDN4O14493 209 aa12.88□□□□□ -0.35
ACTN1-219ENST00000556432 EEF1E1O43324 174 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms