RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 IRAK3Q9Y616 596 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 A0A1W2PRU2 124 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 SH3D21A4FU49 640 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 ZNF840PA6NDX5 716 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 CLDN24A6NM45 220 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 HHLA1C9JL84 531 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 TSPAN4O14817 238 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 ENTPD6O75354 484 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 PCCBP05166 539 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 ZNF865P0CJ78 1059 aaPredicted RBP14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 UQCRC2P22695 453 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 Q8N402 240 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 TOMM5Q8N4H5 51 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 LINC01465Q8N7H1 131 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 ZNF431Q8TF32 576 aaPredicted RBP14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 PDCD10Q9BUL8 212 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 C1QTNF7Q9BXJ2 289 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 TTYH1Q9H313 450 aaPredicted RBP14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 IL26Q9NPH9 171 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 PGAP2Q9UHJ9 254 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 ARFGEF1Q9Y6D6 1849 aa14.45□□□□□ -0.1
ARHGEF40-207ENST00000556399 CARNS1A5YM72 827 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 MUSKO15146 869 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 MCCD1P59942 119 aaPredicted RBP14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 PARP16Q8N5Y8 322 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 FAM86B1Q8N7N1 296 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 SH3RF2Q8TEC5 729 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 CXorf40BQ96DE9 158 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 ERMAPQ96PL5 475 aaPredicted RBP14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 NTMT1Q9BV86 223 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 TRMT61BQ9BVS5 477 aaKnown RBP14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 PCBD2Q9H0N5 130 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 ZNF385DQ9H6B1 395 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 TAC3Q9UHF0 121 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 SLX4Q8IY92 1834 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 I3L521 148 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 FAAHO00519 579 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 CDK1P06493 297 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 MTHFD2P13995 350 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 FAUP35544 74 aaKnown RBP14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 STARP49675 285 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 CCR8P51685 355 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 AP3S2P59780 193 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 PITPNAQ00169 270 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 VEZF1Q14119 521 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 MICAQ29983 383 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 TSPAN33Q86UF1 283 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 ADGRG2Q8IZP9 1017 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 OR4C6Q8NH72 309 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 OVCA2Q8WZ82 227 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 PIGKQ92643 395 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 RGMAQ96B86 450 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 IFT52Q9Y366 437 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 GABARAPO95166 117 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 NUDT14O95848 222 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 GJA1P17302 382 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 PPP3R1P63098 170 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 PRKCZQ05513 592 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 SLC9A5Q14940 896 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 EGLN2Q96KS0 407 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 GSDMCQ9BYG8 508 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 RBM38Q9H0Z9 239 aaKnown RBP14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 MYADML2A6NDP7 307 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 SMCHD1A6NHR9 2005 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 TMX2-CTNND1H3BSU7 103 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 IL3P08700 152 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 LAG3P18627 525 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 ATF4P18848 351 aaPredicted RBP14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 STK19P49842 368 aaPredicted RBP14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 SELENOWP63302 87 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 BIKQ13323 160 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 LINGO2Q7L985 606 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 SLC22A15Q8IZD6 547 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 HUS1BQ8NHY5 278 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 ZNF514Q96K75 400 aaPredicted RBP14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 DPAGT1Q9H3H5 408 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 EXOSC1Q9Y3B2 195 aaKnown RBP14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 OR10H1Q9Y4A9 318 aa14.44□□□□□ -0.1
ARHGEF40-207ENST00000556399 MID1O15344 667 aa14.43□□□□□ -0.1
ARHGEF40-207ENST00000556399 TSPAN6O43657 245 aa14.43□□□□□ -0.1
ARHGEF40-207ENST00000556399 CPNE6O95741 557 aa14.43□□□□□ -0.1
ARHGEF40-207ENST00000556399 CELP19835 753 aa14.43□□□□□ -0.1
ARHGEF40-207ENST00000556399 HOXC13P31276 330 aa14.43□□□□□ -0.1
ARHGEF40-207ENST00000556399 MLLT10P55197 1068 aa14.43□□□□□ -0.1
ARHGEF40-207ENST00000556399 EIF4HQ15056 248 aaKnown RBP14.43□□□□□ -0.1
ARHGEF40-207ENST00000556399 AMZ2Q86W34 360 aa14.43□□□□□ -0.1
ARHGEF40-207ENST00000556399 AUTS2Q8WXX7 1259 aa14.43□□□□□ -0.1
ARHGEF40-207ENST00000556399 NELL2Q99435 816 aa14.43□□□□□ -0.1
ARHGEF40-207ENST00000556399 SLC12A9Q9BXP2 914 aa14.43□□□□□ -0.1
ARHGEF40-207ENST00000556399 BHLHE41Q9C0J9 482 aaPredicted RBP14.43□□□□□ -0.1
ARHGEF40-207ENST00000556399 OR7A17O14581 309 aa14.43□□□□□ -0.1
ARHGEF40-207ENST00000556399 STOMP27105 288 aa14.43□□□□□ -0.1
ARHGEF40-207ENST00000556399 DAPP51397 102 aa14.43□□□□□ -0.1
ARHGEF40-207ENST00000556399 ZNF461Q8TAF7 563 aa14.43□□□□□ -0.1
ARHGEF40-207ENST00000556399 CPPED1Q9BRF8 314 aaPredicted RBP14.43□□□□□ -0.1
ARHGEF40-207ENST00000556399 STRCQ7RTU9 1775 aa14.43□□□□□ -0.1
ARHGEF40-207ENST00000556399 SLC35F4A4IF30 521 aa14.43□□□□□ -0.1
ARHGEF40-207ENST00000556399 ADH1CP00326 375 aa14.43□□□□□ -0.1
ARHGEF40-207ENST00000556399 IFNA7P01567 189 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms