RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 CEACAM19Q7Z692 300 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 ZC3H3Q8IXZ2 948 aaKnown RBP2.45□□□□□ -2.02
SCFD1-218ENST00000556256 FAM9BQ8IZU0 186 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 CLYBLQ8N0X4 340 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 ABHD12Q8N2K0 398 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 CD99L2Q8TCZ2 262 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 MAPK15Q8TD08 544 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 CASP10Q92851 521 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 SLC45A3Q96JT2 553 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 ZIM3Q96PE6 472 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 PANX3Q96QZ0 392 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 OVOL2Q9BRP0 275 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 ACPTQ9BZG2 426 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 SLITRK2Q9H156 845 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 MMADHCQ9H3L0 296 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-218ENST00000556256 EXOC1Q9NV70 894 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 SLC12A6Q9UHW9 1150 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 NSG2Q9Y328 171 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 SPATA31D1Q6ZQQ2 1576 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 NEDD4P46934 1319 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 NPHP3Q7Z494 1330 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 A0A087WZ39 114 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 A0A087X0K7 114 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 GTPBP10A4D1E9 387 aaKnown RBP2.44□□□□□ -2.02
SCFD1-218ENST00000556256 LRRD1A4D1F6 860 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 SRRM4A7MD48 611 aaKnown RBP2.44□□□□□ -2.02
SCFD1-218ENST00000556256 A8MVM7 634 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 KRTAP4-16G5E9R7 235 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-218ENST00000556256 PGRMC2O15173 223 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 TTI1O43156 1089 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 MLNRO43193 412 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 KIF5CO60282 957 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 KRT6AP02538 564 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 KRT6BP04259 564 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 UROSP10746 265 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 GOT1P17174 413 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 VCLP18206 1134 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 KLK2P20151 261 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 AADACP22760 399 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 HLA-FP30511 346 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 SRD5A2P31213 254 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 CASP3P42574 277 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 MAGEB1P43366 347 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 KRT6CP48668 564 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 CLCN4P51793 760 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 CYCSP99999 105 aaKnown RBP2.44□□□□□ -2.02
SCFD1-218ENST00000556256 GRB14Q14449 540 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 MTF1Q14872 753 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 PPA1Q15181 289 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 DUSP5Q16690 384 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 SMU1Q2TAY7 513 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 FUT11Q495W5 492 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 SLC39A12Q504Y0 691 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 ZNF542PQ5EBM4 170 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 IGFL3Q6UXB1 125 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 CROCCP3Q8IVE0 287 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 TEX26Q8N6G2 289 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 TMCO5AQ8N6Q1 288 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 TMEM99Q8N816 258 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 ZNF713Q8N859 430 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-218ENST00000556256 NUP37Q8NFH4 326 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 LRRC15Q8TF66 581 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 BCL2L2Q92843 193 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-218ENST00000556256 NXPE2Q96DL1 559 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 ZNF486Q96H40 463 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-218ENST00000556256 EPSTI1Q96J88 318 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 AGAP4Q96P64 663 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 NEDD4LQ96PU5 975 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 C17orf62Q9BQA9 187 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 ZNF577Q9BSK1 485 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 SLC39A8Q9C0K1 460 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 HOXD1Q9GZZ0 328 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 FNDC4Q9H6D8 234 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-218ENST00000556256 TMEM161AQ9NX61 479 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 HACD3Q9P035 362 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 PCDHGA1Q9Y5H4 931 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 SELENOKQ9Y6D0 94 aa2.44□□□□□ -2.02
SCFD1-218ENST00000556256 ACEP12821 1306 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 A0A0A6YYC8 382 aaPredicted RBP2.43□□□□□ -2.02
SCFD1-218ENST00000556256 C13orf42A0A1B0GVH6 325 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 FAM149AA5PLN7 773 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 GLTPD2A6NH11 291 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 NKX6-3A6NJ46 265 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 I3L1I5 382 aaPredicted RBP2.43□□□□□ -2.02
SCFD1-218ENST00000556256 RNF103O00237 685 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 SLC1A7O00341 560 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 TLX2O43763 284 aaPredicted RBP2.43□□□□□ -2.02
SCFD1-218ENST00000556256 ECE2O60344 883 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 ATP9AO75110 1047 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 RAD51DO75771 328 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 MT-ND2P03891 347 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 HOXD4P09016 255 aaPredicted RBP2.43□□□□□ -2.02
SCFD1-218ENST00000556256 OAS2P29728 719 aaKnown RBP2.43□□□□□ -2.02
SCFD1-218ENST00000556256 LYZP61626 148 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 FKBP1BP68106 108 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 AKAP17AQ02040 695 aaKnown RBP2.43□□□□□ -2.02
SCFD1-218ENST00000556256 CETN1Q12798 172 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 FAM106AQ4KMX7 169 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 AARDQ4LEZ3 155 aa2.43□□□□□ -2.02
SCFD1-218ENST00000556256 EIPR1Q53HC9 387 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms