RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 LDB1Q86U70 411 aaPredicted RBP5.49□□□□□ -1.53
PRKCH-220ENST00000556164 TMEM200AQ86VY9 491 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 CRLF3Q8IUI8 442 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 EID3Q8N140 333 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 GHDCQ8N2G8 530 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 TMEM178AQ8NBL3 297 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 FAM98AQ8NCA5 519 aaKnown RBP5.49□□□□□ -1.53
PRKCH-220ENST00000556164 HMGCLL1Q8TB92 370 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 MAGEC3Q8TD91 643 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 PHF10Q8WUB8 498 aaKnown RBP5.49□□□□□ -1.53
PRKCH-220ENST00000556164 NANOS1Q8WY41 292 aaKnown RBP5.49□□□□□ -1.53
PRKCH-220ENST00000556164 HPS1Q92902 700 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 IMMP1LQ96LU5 166 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 ZNF354BQ96LW1 612 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 FOPNLQ96NB1 174 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 FANCD2OSQ96PS1 177 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 PANX3Q96QZ0 392 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 MCMBPQ9BTE3 642 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 SORBS1Q9BX66 1292 aaKnown RBP5.49□□□□□ -1.53
PRKCH-220ENST00000556164 VN1R1Q9GZP7 353 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 DRC3Q9H069 523 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 ENKD1Q9H0I2 346 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 SYNPO2LQ9H987 977 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 MRPS30Q9NP92 439 aaKnown RBP5.49□□□□□ -1.53
PRKCH-220ENST00000556164 ABCF3Q9NUQ8 709 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 GFOD1Q9NXC2 390 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 COQ3Q9NZJ6 369 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 SPATA7Q9P0W8 599 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 AASSQ9UDR5 926 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 C19orf25Q9UFG5 118 aaPredicted RBP5.49□□□□□ -1.53
PRKCH-220ENST00000556164 GNPTGQ9UJJ9 305 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 ANAPC5Q9UJX4 755 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 TFR2Q9UP52 801 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 R3HDM2Q9Y2K5 976 aaKnown RBP5.49□□□□□ -1.53
PRKCH-220ENST00000556164 KLK4Q9Y5K2 254 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 SNX5Q9Y5X3 404 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 DNAJC13O75165 2243 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 MTORP42345 2549 aa5.49□□□□□ -1.53
PRKCH-220ENST00000556164 PRRC2AP48634 2157 aaKnown RBP5.49□□□□□ -1.53
PRKCH-220ENST00000556164 ZNF407Q9C0G0 2248 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 SPG11Q96JI7 2443 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 EML6Q6ZMW3 1958 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 ASPDHA6ND91 283 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 GOLGA6L9A6NEM1 432 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 CCDC154A6NI56 674 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 GABRR3A8MPY1 467 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 E9PLN8 166 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 P2RX6O15547 441 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 FOXS1O43638 330 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 PHF2O75151 1096 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 STATHP02808 62 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 CD99P14209 185 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 PKMP14618 531 aaKnown RBP5.48□□□□□ -1.53
PRKCH-220ENST00000556164 ALOX15P16050 662 aaPredicted RBP5.48□□□□□ -1.53
PRKCH-220ENST00000556164 ZNF24P17028 368 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 ALOX12P18054 663 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 CNTFP26441 200 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 CD96P40200 585 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 ADH7P40394 386 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 AVPR1BP47901 424 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 TTPAP49638 278 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 NR1H2P55055 460 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 EIF3BP55884 814 aaKnown RBP5.48□□□□□ -1.53
PRKCH-220ENST00000556164 RWDD2BP57060 319 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 CDH17Q12864 832 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 MAPKAPK3Q16644 382 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 NDUFA9Q16795 377 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 PLAG1Q6DJT9 500 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 H3F3CQ6NXT2 135 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 GALNTL5Q7Z4T8 443 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.48□□□□□ -1.53
PRKCH-220ENST00000556164 PAQR7Q86WK9 346 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 DOLPP1Q86YN1 238 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 CNGA4Q8IV77 575 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 VSTM4Q8IW00 320 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 SIAH3Q8IW03 269 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 OTUD6BQ8N6M0 293 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 HORMAD2Q8N7B1 307 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 ATG16L2Q8NAA4 619 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 ACBD4Q8NC06 268 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 OR9A4Q8NGU2 314 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 SMPDL3AQ92484 453 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 HTRA1Q92743 480 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 SCMH1Q96GD3 660 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 ZNF778Q96MU6 729 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 DMRTA2Q96SC8 542 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 MYCBPQ99417 103 aaPredicted RBP5.48□□□□□ -1.53
PRKCH-220ENST00000556164 CYTH2Q99418 400 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 MDFIQ99750 246 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 VKORC1Q9BQB6 163 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 TRIM51Q9BSJ1 452 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 FAM167BQ9BTA0 163 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 TMEM121Q9BTD3 319 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 CNPPD1Q9BV87 410 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 UTP6Q9NYH9 597 aaKnown RBP5.48□□□□□ -1.53
PRKCH-220ENST00000556164 LRFN1Q9P244 771 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 MARCH4Q9P2E8 410 aaPredicted RBP5.48□□□□□ -1.53
PRKCH-220ENST00000556164 TAC3Q9UHF0 121 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 PCYOX1Q9UHG3 505 aa5.48□□□□□ -1.53
PRKCH-220ENST00000556164 TCAF1Q9Y4C2 921 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms