RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 CEP97Q8IW35 865 aa17.55■□□□□ 0.4
CDKN3-209ENST00000556102 KRT78Q8N1N4 520 aa17.55■□□□□ 0.4
CDKN3-209ENST00000556102 TMEM156Q8N614 296 aa17.55■□□□□ 0.4
CDKN3-209ENST00000556102 C16orf52Q8NHV5 167 aa17.55■□□□□ 0.4
CDKN3-209ENST00000556102 NCLNQ969V3 563 aa17.55■□□□□ 0.4
CDKN3-209ENST00000556102 PITHD1Q9GZP4 211 aaPredicted RBP17.55■□□□□ 0.4
CDKN3-209ENST00000556102 RHOJQ9H4E5 214 aa17.55■□□□□ 0.4
CDKN3-209ENST00000556102 NT5DC2Q9H857 520 aa17.55■□□□□ 0.4
CDKN3-209ENST00000556102 PNO1Q9NRX1 252 aaKnown RBP17.55■□□□□ 0.4
CDKN3-209ENST00000556102 ZNF223Q9UK11 482 aaPredicted RBP17.55■□□□□ 0.4
CDKN3-209ENST00000556102 MRPS33Q9Y291 106 aaKnown RBP17.55■□□□□ 0.4
CDKN3-209ENST00000556102 CLDN16Q9Y5I7 305 aa17.55■□□□□ 0.4
CDKN3-209ENST00000556102 POLQO75417 2590 aa17.55■□□□□ 0.4
CDKN3-209ENST00000556102 ZNF407Q9C0G0 2248 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 SYNDIG1LA6NDD5 238 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 E7ESA3 106 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 TGFBR3LH3BV60 316 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 CLDN4O14493 209 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 TP73O15350 636 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 B3GALT2O43825 422 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 CLEC3AO75596 197 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 TFEBP19484 476 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 HPDP32754 393 aaPredicted RBP17.54■□□□□ 0.4
CDKN3-209ENST00000556102 PTGS2P35354 604 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 RFC3P40938 356 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 GPR143P51810 404 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 ILF2Q12905 390 aaKnown RBP17.54■□□□□ 0.4
CDKN3-209ENST00000556102 SLC13A2Q13183 592 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 TGFBIQ15582 683 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 C3P1Q6ZMU1 363 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 ZFP62Q8NB50 900 aaPredicted RBP17.54■□□□□ 0.4
CDKN3-209ENST00000556102 FAM57AQ8TBR7 257 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 QRFPRQ96P65 431 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 SPOCK3Q9BQ16 436 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 CCDC77Q9BR77 488 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 MCMBPQ9BTE3 642 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 CAPS2Q9BXY5 557 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 DERL2Q9GZP9 239 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 ADAP2Q9NPF8 381 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 GPRC5BQ9NZH0 403 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 PPT2Q9UMR5 302 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 AKAP9Q99996 3911 aa17.54■□□□□ 0.4
CDKN3-209ENST00000556102 DNAJC13O75165 2243 aa17.53■□□□□ 0.4
CDKN3-209ENST00000556102 ANKDD1BA6NHY2 528 aa17.53■□□□□ 0.4
CDKN3-209ENST00000556102 NCF1BA6NI72 391 aaPredicted RBP17.53■□□□□ 0.4
CDKN3-209ENST00000556102 NCF1CA8MVU1 366 aaPredicted RBP17.53■□□□□ 0.4
CDKN3-209ENST00000556102 HS6ST1O60243 411 aa17.53■□□□□ 0.4
CDKN3-209ENST00000556102 ZFAND5O76080 213 aa17.53■□□□□ 0.4
CDKN3-209ENST00000556102 NCF1P14598 390 aaPredicted RBP17.53■□□□□ 0.4
CDKN3-209ENST00000556102 PPP2R1BP30154 601 aa17.53■□□□□ 0.4
CDKN3-209ENST00000556102 SSR4P51571 173 aa17.53■□□□□ 0.4
CDKN3-209ENST00000556102 HNRNPFP52597 415 aaKnown RBP17.53■□□□□ 0.4
CDKN3-209ENST00000556102 SLC12A2P55011 1212 aa17.53■□□□□ 0.4
CDKN3-209ENST00000556102 ADPRMQ3LIE5 342 aa17.53■□□□□ 0.4
CDKN3-209ENST00000556102 CMPK2Q5EBM0 449 aa17.53■□□□□ 0.4
CDKN3-209ENST00000556102 TRIM40Q6P9F5 258 aa17.53■□□□□ 0.4
CDKN3-209ENST00000556102 MDGA2Q7Z553 956 aa17.53■□□□□ 0.4
CDKN3-209ENST00000556102 CREG2Q8IUH2 290 aa17.53■□□□□ 0.4
CDKN3-209ENST00000556102 ZNF595Q8IYB9 648 aa17.53■□□□□ 0.4
CDKN3-209ENST00000556102 TCAIMQ8N3R3 496 aa17.53■□□□□ 0.4
CDKN3-209ENST00000556102 TMEM52Q8NDY8 209 aa17.53■□□□□ 0.4
CDKN3-209ENST00000556102 OR2L5Q8NG80 312 aa17.53■□□□□ 0.4
CDKN3-209ENST00000556102 SDCCAG3Q96C92 435 aa17.53■□□□□ 0.4
CDKN3-209ENST00000556102 TRIM31Q9BZY9 425 aa17.53■□□□□ 0.4
CDKN3-209ENST00000556102 EHD1Q9H4M9 534 aa17.53■□□□□ 0.4
CDKN3-209ENST00000556102 TIMMDC1Q9NPL8 285 aa17.53■□□□□ 0.4
CDKN3-209ENST00000556102 COQ3Q9NZJ6 369 aa17.53■□□□□ 0.4
CDKN3-209ENST00000556102 YARS2Q9Y2Z4 477 aaKnown RBP17.53■□□□□ 0.4
CDKN3-209ENST00000556102 A0A1B0GTH9 108 aa17.52■□□□□ 0.4
CDKN3-209ENST00000556102 CCDC188H7C350 402 aa17.52■□□□□ 0.4
CDKN3-209ENST00000556102 TBX6O95947 436 aaPredicted RBP17.52■□□□□ 0.4
CDKN3-209ENST00000556102 TPOP07202 933 aa17.52■□□□□ 0.4
CDKN3-209ENST00000556102 PLA2G16P53816 162 aa17.52■□□□□ 0.4
CDKN3-209ENST00000556102 GPR85P60893 370 aa17.52■□□□□ 0.4
CDKN3-209ENST00000556102 POU4F1Q01851 419 aa17.52■□□□□ 0.4
CDKN3-209ENST00000556102 CBLBQ13191 982 aa17.52■□□□□ 0.4
CDKN3-209ENST00000556102 VN1R5Q7Z5H4 357 aa17.52■□□□□ 0.4
CDKN3-209ENST00000556102 CD163Q86VB7 1156 aa17.52■□□□□ 0.4
CDKN3-209ENST00000556102 TMEM132CQ8N3T6 1108 aa17.52■□□□□ 0.4
CDKN3-209ENST00000556102 FAM47BQ8NA70 645 aa17.52■□□□□ 0.4
CDKN3-209ENST00000556102 CA5BP1Q8WTZ4 195 aa17.52■□□□□ 0.4
CDKN3-209ENST00000556102 C14orf79Q96F83 325 aa17.52■□□□□ 0.4
CDKN3-209ENST00000556102 SERINC2Q96SA4 455 aa17.52■□□□□ 0.4
CDKN3-209ENST00000556102 TMEM79Q9BSE2 394 aa17.52■□□□□ 0.4
CDKN3-209ENST00000556102 REXO4Q9GZR2 422 aaKnown RBP17.52■□□□□ 0.4
CDKN3-209ENST00000556102 ENKD1Q9H0I2 346 aa17.52■□□□□ 0.4
CDKN3-209ENST00000556102 CNOT10Q9H9A5 744 aaKnown RBP17.52■□□□□ 0.4
CDKN3-209ENST00000556102 PLSCR2Q9NRY7 297 aa17.52■□□□□ 0.4
CDKN3-209ENST00000556102 DNAJC11Q9NVH1 559 aa17.52■□□□□ 0.4
CDKN3-209ENST00000556102 WWOXQ9NZC7 414 aa17.52■□□□□ 0.4
CDKN3-209ENST00000556102 EFCAB8A8MWE9 144 aa17.51■□□□□ 0.39
CDKN3-209ENST00000556102 CLGNO14967 610 aa17.51■□□□□ 0.39
CDKN3-209ENST00000556102 TAPBPO15533 448 aa17.51■□□□□ 0.39
CDKN3-209ENST00000556102 PRKNO60260 465 aaPredicted RBP17.51■□□□□ 0.39
CDKN3-209ENST00000556102 CDC40O60508 579 aaKnown RBP eCLIP17.51■□□□□ 0.39
CDKN3-209ENST00000556102 WISP3O95389 354 aaPredicted RBP17.51■□□□□ 0.39
CDKN3-209ENST00000556102 TUBB4AP04350 444 aa17.51■□□□□ 0.39
CDKN3-209ENST00000556102 CERS1P27544 350 aa17.51■□□□□ 0.39
CDKN3-209ENST00000556102 GGT5P36269 586 aa17.51■□□□□ 0.39
CDKN3-209ENST00000556102 MTTPP55157 894 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms