RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 ZBTB11O95625 1053 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-216ENST00000556083 HMGCLP35914 325 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 TMBIM6P55061 237 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 OR12D2P58182 307 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 GNG2P59768 71 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 C6orf120Q7Z4R8 191 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 SAPCD2Q86UD0 394 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 OR2T33Q8NG76 320 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 OSBPL7Q9BZF2 842 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 LDAHQ9H6V9 325 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 COPZ2Q9P299 210 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 LAMP5Q9UJQ1 280 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 MKL2Q9ULH7 1088 aa10.34□□□□□ -0.75
ACTN1-216ENST00000556083 BORCS7-ASMTA0A0B4J1R7 106 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-216ENST00000556083 C5orf51A6NDU8 294 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 LRRN3E7EW58 273 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 RAD51DO75771 328 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 MYCLP1P12525 358 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-216ENST00000556083 IL4RP24394 825 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 C4orf46Q504U0 113 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 C3orf33Q6P1S2 294 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 GALNTL5Q7Z4T8 443 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 MINDY1Q8N5J2 469 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 SHKBP1Q8TBC3 707 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 ELP5Q8TE02 316 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 CANT1Q8WVQ1 401 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 LRRN3Q9H3W5 708 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 TAS2R10Q9NYW0 307 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 SPO11Q9Y5K1 396 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 SNED1Q8TER0 1413 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 FAM149AA5PLN7 773 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 FESP07332 822 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 RHCEP18577 417 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 ACRV1P26436 265 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 ACVRL1P37023 503 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 GABARAPL2P60520 117 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 HMGCS1Q01581 520 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 CDK10Q15131 360 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 ATP6AP1Q15904 470 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 WSCD2Q2TBF2 565 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 ZNF404Q494X3 552 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 HFE2Q6ZVN8 426 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 OSTM1Q86WC4 334 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 TREML1Q86YW5 311 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 GALNT15Q8N3T1 639 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 HSH2DQ96JZ2 352 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 ZFP3Q96NJ6 502 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 ZNF559Q9BR84 538 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 DOHHQ9BU89 302 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 RPF2Q9H7B2 306 aaKnown RBP10.33□□□□□ -0.76
ACTN1-216ENST00000556083 HRASLS2Q9NWW9 162 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 IGKV6-21A0A0C4DH24 114 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 J3KR12 359 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 PCDHGA12O60330 932 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 ZNF821O75541 412 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-216ENST00000556083 SLITRK5O94991 958 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 SLC6A8P48029 635 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 KCNQ1P51787 676 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 PER3P56645 1201 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 FOXK1P85037 733 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 STEAP4Q687X5 459 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 NOXRED1Q6NXP6 359 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 MRPL10Q7Z7H8 261 aaKnown RBP10.33□□□□□ -0.76
ACTN1-216ENST00000556083 LRRC25Q8N386 305 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-216ENST00000556083 PHOSPHO2Q8TCD6 241 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 CLEC4CQ8WTT0 213 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 C7orf43Q8WVR3 580 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 ISG20Q96AZ6 181 aaKnown RBP10.33□□□□□ -0.76
ACTN1-216ENST00000556083 IL4I1Q96RQ9 567 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 VRK1Q99986 396 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-216ENST00000556083 TTYH2Q9BSA4 534 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 SLC6A16Q9GZN6 736 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 C12orf65Q9H3J6 166 aaKnown RBP10.33□□□□□ -0.76
ACTN1-216ENST00000556083 OAZ3Q9UMX2 235 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 WTIPA6NIX2 430 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-216ENST00000556083 PLD2O14939 933 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 SLC10A3P09131 477 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 BCKDHAP12694 445 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 IFI30P13284 250 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 DRD1P21728 446 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 NTSR1P30989 418 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 GDI2P50395 445 aaKnown RBP10.33□□□□□ -0.76
ACTN1-216ENST00000556083 RPS13P62277 151 aaKnown RBP10.33□□□□□ -0.76
ACTN1-216ENST00000556083 RPS15P62841 145 aaKnown RBP10.33□□□□□ -0.76
ACTN1-216ENST00000556083 ARF5P84085 180 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 ARHGAP19Q14CB8 494 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 FBXO46Q6PJ61 603 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-216ENST00000556083 RNF111Q6ZNA4 994 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 TMPPEQ6ZT21 453 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 TMEM135Q86UB9 458 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 FIBINQ8TAL6 211 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 NPLOC4Q8TAT6 608 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 PIGKQ92643 395 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 HTRA1Q92743 480 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 PMEPA1Q969W9 287 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 NPLQ9BXD5 320 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-216ENST00000556083 RDH8Q9NYR8 311 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 GDE1Q9NZC3 331 aa10.33□□□□□ -0.76
ACTN1-216ENST00000556083 COMMD3Q9UBI1 195 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms