RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 CHRNB3Q05901 458 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 TDGQ13569 410 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 TSTA3Q13630 321 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-235ENST00000556082 VEZF1Q14119 521 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 KRT33BQ14525 404 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 RBBP5Q15291 538 aaKnown RBP7.92□□□□□ -1.14
ATXN3-235ENST00000556082 ZIC1Q15915 447 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 GTDC1Q4AE62 458 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 UGT2A3Q6UWM9 527 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 KIAA1324Q6UXG2 1013 aaKnown RBP7.92□□□□□ -1.14
ATXN3-235ENST00000556082 GCNT7Q6ZNI0 430 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 ZBTB49Q6ZSB9 765 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 SYT13Q7L8C5 426 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 ABI3BPQ7Z7G0 1075 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 TMEM145Q8NBT3 493 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 ZNF740Q8NDX6 193 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 GPR156Q8NFN8 814 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 OR52E1Q8NGJ3 308 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 WDR48Q8TAF3 677 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 OR1E3Q8WZA6 343 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 TBC1D20Q96BZ9 403 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 MIEF2Q96C03 454 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 FAM120BQ96EK7 910 aaKnown RBP7.92□□□□□ -1.14
ATXN3-235ENST00000556082 PRAP1Q96NZ9 151 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 OSGEPL1Q9H4B0 414 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 UBE2ZQ9H832 354 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-235ENST00000556082 DDX31Q9H8H2 851 aaKnown RBP7.92□□□□□ -1.14
ATXN3-235ENST00000556082 CARS2Q9HA77 564 aaKnown RBP7.92□□□□□ -1.14
ATXN3-235ENST00000556082 AASDHPPTQ9NRN7 309 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 IMP3Q9NV31 184 aaKnown RBP7.92□□□□□ -1.14
ATXN3-235ENST00000556082 TAS2R7Q9NYW3 318 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 ZNF282Q9UDV7 671 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-235ENST00000556082 EBF1Q9UH73 591 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 SCOCQ9UIL1 159 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 VPS4AQ9UN37 437 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 SNX7Q9UNH6 387 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 USP22Q9UPT9 525 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 ERVK-11Q9UQG0 969 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 KCNK6Q9Y257 313 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 PLEKHM1Q9Y4G2 1056 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 DGKBQ9Y6T7 804 aa7.92□□□□□ -1.14
ATXN3-235ENST00000556082 TICRRQ7Z2Z1 1910 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 C7orf72A4D263 438 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 PDZK1P1A8MUH7 402 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 CLOCKO15516 846 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 PAX4O43316 350 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 SEMA4FO95754 770 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 GSNP06396 782 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 KLK1P06870 262 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 CHRNB1P11230 501 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 CKMT2P17540 419 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 TPP2P29144 1249 aaPredicted RBP7.91□□□□□ -1.14
ATXN3-235ENST00000556082 SHMT2P34897 504 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 AHRP35869 848 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 RABIFP47224 123 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 CLDN2P57739 230 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 TAS2R50P59544 299 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 SRP54P61011 504 aaKnown RBP7.91□□□□□ -1.14
ATXN3-235ENST00000556082 TXNL4AP83876 142 aaKnown RBP7.91□□□□□ -1.14
ATXN3-235ENST00000556082 MEF2AQ02078 507 aaPredicted RBP7.91□□□□□ -1.14
ATXN3-235ENST00000556082 RELAQ04206 551 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 C2orf80Q0P641 193 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 MYBPC3Q14896 1274 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 PDK3Q15120 406 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 SMAD2Q15796 467 aaKnown RBP7.91□□□□□ -1.14
ATXN3-235ENST00000556082 VMACQ2NL98 169 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 HKDC1Q2TB90 917 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 ADPRMQ3LIE5 342 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 NHSL2Q5HYW2 709 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 CCNYL2Q5T2Q4 361 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 KIAA0895LQ68EN5 471 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 DUS1LQ6P1R4 473 aaKnown RBP7.91□□□□□ -1.14
ATXN3-235ENST00000556082 FDX2Q6P4F2 183 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 ENPP7Q6UWV6 458 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 ZNF852Q6ZMS4 543 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 ZNF621Q6ZSS3 439 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 ZNF551Q7Z340 670 aaPredicted RBP7.91□□□□□ -1.14
ATXN3-235ENST00000556082 AMIGO2Q86SJ2 522 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 FAM124AQ86V42 546 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 ANKRD46Q86W74 232 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 PHACTR4Q8IZ21 702 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 TBC1D19Q8N5T2 526 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 ANKRD53Q8N9V6 530 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 LMNTD1Q8N9Z9 388 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 FAM47BQ8NA70 645 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 CREB3L4Q8TEY5 395 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 ZFP90Q8TF47 636 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 SNX19Q92543 992 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 FIG4Q92562 907 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 TFAP2CQ92754 450 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 GFM2Q969S9 779 aaKnown RBP7.91□□□□□ -1.14
ATXN3-235ENST00000556082 RGMAQ96B86 450 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 SLC22A18Q96BI1 424 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 PPCDCQ96CD2 204 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 PYURFQ96I23 114 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 SLC29A1Q99808 456 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 CENPKQ9BS16 269 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 ZNF717Q9BY31 904 aaPredicted RBP7.91□□□□□ -1.14
ATXN3-235ENST00000556082 CHST8Q9H2A9 424 aa7.91□□□□□ -1.14
ATXN3-235ENST00000556082 SEMA6AQ9H2E6 1030 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms