RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 BATF2Q8N1L9 274 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 DDHD1Q8NEL9 900 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 TRPV3Q8NET8 790 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 OR4D10Q8NGI6 311 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 MRGPRDQ8TDS7 321 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 SLC13A3Q8WWT9 602 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 CASP10Q92851 521 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 SLC35C1Q96A29 364 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 FBXO17Q96EF6 278 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 F2RL3Q96RI0 385 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 NTMT1Q9BV86 223 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 ZDHHC6Q9H6R6 413 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 MARCH7Q9H992 704 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 NDUFA13Q9P0J0 144 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 TEKT2Q9UIF3 430 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 TSPAN16Q9UKR8 245 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 ANGPTL3Q9Y5C1 460 aa4.66□□□□□ -1.66
VRK1-205ENST00000555402 DHX29Q7Z478 1369 aaKnown RBP4.65□□□□□ -1.66
VRK1-205ENST00000555402 SPATA31D1Q6ZQQ2 1576 aa4.65□□□□□ -1.66
VRK1-205ENST00000555402 RNF103-CHMP3A0A140T963 221 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 A0A1W2PR80 420 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 TCP10L2B9ZVM9 353 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 SLCO1B7G3V0H7 640 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 RNF103O00237 685 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 SLC28A1O00337 649 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 ECE2O60344 883 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 KHDRBS3O75525 346 aaKnown RBP4.65□□□□□ -1.67
VRK1-205ENST00000555402 STBD1O95210 358 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 CALCAP01258 141 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 PCP11498 1178 aaKnown RBP4.65□□□□□ -1.67
VRK1-205ENST00000555402 GNB3P16520 340 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 AHCYP23526 432 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 NSFP46459 744 aaKnown RBP4.65□□□□□ -1.67
VRK1-205ENST00000555402 IL1RL1Q01638 556 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 TRA2AQ13595 282 aaKnown RBP eCLIP4.65□□□□□ -1.67
VRK1-205ENST00000555402 SPHARQ15513 63 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 TAB1Q15750 504 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 CCDC6Q16204 474 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 KIF26BQ2KJY2 2108 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 FAM106AQ4KMX7 169 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 SNRNP48Q6IEG0 339 aaKnown RBP4.65□□□□□ -1.67
VRK1-205ENST00000555402 GET4Q7L5D6 327 aaPredicted RBP4.65□□□□□ -1.67
VRK1-205ENST00000555402 SLC43A2Q8N370 569 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 SIDT2Q8NBJ9 832 aaKnown RBP4.65□□□□□ -1.67
VRK1-205ENST00000555402 OR5T2Q8NGG2 359 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 UBTD2Q8WUN7 234 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 SMPDL3AQ92484 453 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 PGLYRP2Q96PD5 576 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 PKP2Q99959 881 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 CLEC7AQ9BXN2 247 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 XPO4Q9C0E2 1151 aaKnown RBP4.65□□□□□ -1.67
VRK1-205ENST00000555402 WWTR1Q9GZV5 400 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 TMEM245Q9H330 911 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 ZNF665Q9H7R5 613 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 VIPAS39Q9H9C1 493 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 MIS18AQ9NYP9 233 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 PLEK2Q9NYT0 353 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 ZNF319Q9P2F9 582 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 PILRAQ9UKJ1 303 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 ISY1Q9ULR0 285 aaKnown RBP4.65□□□□□ -1.67
VRK1-205ENST00000555402 PPP1R3CQ9UQK1 317 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 MRPS28Q9Y2Q9 187 aaKnown RBP4.65□□□□□ -1.67
VRK1-205ENST00000555402 RNF123Q5XPI4 1314 aa4.65□□□□□ -1.67
VRK1-205ENST00000555402 hCG_38984A0A1B0GV85 526 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 MACROD2A1Z1Q3 448 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 CCDC69A6NI79 296 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 SURF4O15260 269 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 STAM2O75886 525 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 ALPPP05187 535 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 MMP10P09238 476 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 ALPPL2P10696 532 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 ANPEPP15144 967 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 CEBPBP17676 345 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 ACKR3P25106 362 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 GIFP27352 417 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 FEN1P39748 380 aaKnown RBP4.64□□□□□ -1.67
VRK1-205ENST00000555402 TSFMP43897 325 aaKnown RBP4.64□□□□□ -1.67
VRK1-205ENST00000555402 TNFSF10P50591 281 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 HNRNPFP52597 415 aaKnown RBP4.64□□□□□ -1.67
VRK1-205ENST00000555402 STARD6P59095 220 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 BPIFB3P59826 476 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 SRP54P61011 504 aaKnown RBP4.64□□□□□ -1.67
VRK1-205ENST00000555402 GUCY2DQ02846 1103 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 STX1AQ16623 288 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 PWWP2BQ6NUJ5 590 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 BHLHB9Q6PI77 547 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 Q71RC1 249 aaPredicted RBP4.64□□□□□ -1.67
VRK1-205ENST00000555402 DCLK2Q8N568 766 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 LEMD2Q8NC56 503 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 KIAA1524Q8TCG1 905 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 ZNF501Q96CX3 271 aaPredicted RBP4.64□□□□□ -1.67
VRK1-205ENST00000555402 GMPPAQ96IJ6 420 aaPredicted RBP4.64□□□□□ -1.67
VRK1-205ENST00000555402 DGCR6LQ9BY27 220 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 C1orf21Q9H246 121 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 DCLRE1BQ9H816 532 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 WDR81Q562E7 1941 aa4.64□□□□□ -1.67
VRK1-205ENST00000555402 ARHGAP42A6NI28 874 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 NKX6-3A6NJ46 265 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 OGTO15294 1046 aa4.63□□□□□ -1.67
VRK1-205ENST00000555402 B4GAT1O43505 415 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms