RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 ZNF319Q9P2F9 582 aa4.64□□□□□ -1.67
CKS1BP1-201ENST00000555221 WIPI2Q9Y4P8 454 aa4.64□□□□□ -1.67
CKS1BP1-201ENST00000555221 SPAG9O60271 1321 aaKnown RBP4.64□□□□□ -1.67
CKS1BP1-201ENST00000555221 UMODL1Q5DID0 1318 aa4.64□□□□□ -1.67
CKS1BP1-201ENST00000555221 TRBV2A0A0J9YWF9 115 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 RNF103O00237 685 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 PSMD3O43242 534 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 ZFAND5O76080 213 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 FGF19O95750 216 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 ODC1P11926 461 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 MT3P25713 68 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 STIP1P31948 543 aaKnown RBP4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 CCR4P51679 360 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 ATP12AP54707 1039 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 DHODHQ02127 395 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 GFPT1Q06210 699 aaPredicted RBP4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 DRP2Q13474 957 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 GIT2Q14161 759 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 MTF1Q14872 753 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 SPHARQ15513 63 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 KIF6Q6ZMV9 814 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 Q6ZRP5 223 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 RABEPKQ7Z6M1 372 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 FBXW8Q8N3Y1 598 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 ZNF614Q8N883 585 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 TRPV3Q8NET8 790 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 NUP37Q8NFH4 326 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 OR5M9Q8NGP3 310 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 ZNF519Q8TB69 540 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 SMPDL3AQ92484 453 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 ZNF274Q96GC6 653 aaPredicted RBP4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 TMEM245Q9H330 911 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 MARCH7Q9H992 704 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 S100A14Q9HCY8 104 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 B3GAT2Q9NPZ5 323 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 PLEK2Q9NYT0 353 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 IL19Q9UHD0 177 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 UBQLN2Q9UHD9 624 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 PSORS1C1Q9UIG5 152 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 PILRAQ9UKJ1 303 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 EXOC7Q9UPT5 735 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 EXOGQ9Y2C4 368 aaKnown RBP4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 ZHX2Q9Y6X8 837 aa4.63□□□□□ -1.67
CKS1BP1-201ENST00000555221 SCRIBQ14160 1630 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 ATP6AP2A0A1C7CYW4 349 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 SYCE3A1L190 88 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 LMO7DNF2Z398 122 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 NPIPB9F8W1W9 429 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 CCSO14618 274 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 SIGLEC5O15389 551 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 P2RX6O15547 441 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 HTATSF1O43719 755 aaKnown RBP4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 HSF2BPO75031 334 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 LRCH4O75427 683 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 RPLP0P05388 317 aaKnown RBP4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 ABHD2P08910 425 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 CYP3A5P20815 502 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 GJB2P29033 226 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 TNFSF10P50591 281 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 BTG1P62324 171 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 STX1AQ16623 288 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 ADAM5Q6NVV9 412 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 Q6ZTC4 211 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 STHQ8IWL8 128 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 WDSUB1Q8N9V3 476 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 OR9Q2Q8NGE9 314 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 NAF1Q96HR8 494 aaKnown RBP4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 NSMCE3Q96MG7 304 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 NUSAP1Q9BXS6 441 aaKnown RBP4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 TEX13AQ9BXU3 409 aaPredicted RBP4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 FNDC4Q9H6D8 234 aaPredicted RBP4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 ZNF665Q9H7R5 613 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 TEX10Q9NXF1 929 aaPredicted RBP4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 NLGN3Q9NZ94 848 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 KLK11Q9UBX7 282 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 TRMT6Q9UJA5 497 aaKnown RBP4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 TSPAN16Q9UKR8 245 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 TEX264Q9Y6I9 313 aa4.62□□□□□ -1.67
CKS1BP1-201ENST00000555221 SLC9B1P1A6NJY1 282 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 SLC28A1O00337 649 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 SOCS5O75159 536 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 ATP6V1G1O75348 118 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 ZNF821O75541 412 aaPredicted RBP4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 STBD1O95210 358 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 EPOP01588 193 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 CHRNGP07510 517 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 SFTPBP07988 381 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 NUDT17P0C025 328 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 RNF224P0DH78 156 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 CT45A8P0DMV1 189 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 CT45A9P0DMV2 189 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 AREGP15514 252 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 ZNF18P17022 549 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 UGT1A6P19224 532 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 EDNRAP25101 427 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 GALK2Q01415 458 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 GK2Q14410 553 aaPredicted RBP4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 C3AR1Q16581 482 aa4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 RFTN2Q52LD8 501 aaPredicted RBP4.61□□□□□ -1.67
CKS1BP1-201ENST00000555221 CT45A2Q5DJT8 189 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms