RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 MAB21L2Q9Y586 359 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.78□□□□□ -1.64
VRK1-203ENST00000555067 DISP3Q9P2K9 1392 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 ABCC4O15439 1325 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 A0A0U1RQV5 110 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 A0A1B0GUL7 405 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 A0A1W2PP11 408 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 MAPK13O15264 365 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 ACSL4O60488 711 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 RPS6KA5O75582 802 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 TOM1L1O75674 476 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 WDPCPO95876 746 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 ASGR1P07306 291 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 CHRNGP07510 517 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 IQCF3P0C7M6 154 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 HAPLN1P10915 354 aaPredicted RBP4.78□□□□□ -1.64
VRK1-203ENST00000555067 ATP6V1C1P21283 382 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 MARCKSP29966 332 aaPredicted RBP4.78□□□□□ -1.64
VRK1-203ENST00000555067 HLA-FP30511 346 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 SSTR1P30872 391 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 RPL21P46778 160 aaKnown RBP4.78□□□□□ -1.64
VRK1-203ENST00000555067 NR0B1P51843 470 aaKnown RBP4.78□□□□□ -1.64
VRK1-203ENST00000555067 LINC01547P58512 204 aaPredicted RBP4.78□□□□□ -1.64
VRK1-203ENST00000555067 HSF2Q03933 536 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 SULT2A1Q06520 285 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 RASGEF1BQ0VAM2 473 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 NONOQ15233 471 aaKnown RBP eCLIP4.78□□□□□ -1.64
VRK1-203ENST00000555067 TMEM30BQ3MIR4 351 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 RAB6CQ53S08 254 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 TMEM41BQ5BJD5 291 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 PDSS1Q5T2R2 415 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 ARHGEF16Q5VV41 709 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 NCR3LG1Q68D85 454 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 C16orf87Q6PH81 154 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 LRRC70Q7Z2Q7 622 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 ERASQ7Z444 233 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 SLC22A9Q8IVM8 553 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 MISPQ8IVT2 679 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 CENPLQ8N0S6 344 aaPredicted RBP4.78□□□□□ -1.64
VRK1-203ENST00000555067 RYBPQ8N488 228 aaPredicted RBP4.78□□□□□ -1.64
VRK1-203ENST00000555067 C1orf52Q8N6N3 182 aaKnown RBP4.78□□□□□ -1.64
VRK1-203ENST00000555067 BCORP1Q8N888 145 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 GBP7Q8N8V2 638 aaPredicted RBP4.78□□□□□ -1.64
VRK1-203ENST00000555067 SIDT2Q8NBJ9 832 aaKnown RBP4.78□□□□□ -1.64
VRK1-203ENST00000555067 TRIM58Q8NG06 486 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 OR5R1Q8NH85 324 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 ABTB1Q969K4 478 aaPredicted RBP4.78□□□□□ -1.64
VRK1-203ENST00000555067 DHX58Q96C10 678 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 THOC1Q96FV9 657 aaKnown RBP4.78□□□□□ -1.64
VRK1-203ENST00000555067 CMKLR1Q99788 373 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 GPA33Q99795 319 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 CCDC77Q9BR77 488 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 FICDQ9BVA6 458 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 PRRG4Q9BZD6 226 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 NMNAT2Q9BZQ4 307 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 RAB6CQ9H0N0 254 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 TRPC7Q9HCX4 862 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 COPS7AQ9UBW8 275 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 MRPS7Q9Y2R9 242 aaKnown RBP4.78□□□□□ -1.64
VRK1-203ENST00000555067 TMED3Q9Y3Q3 217 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 SPACA6W5XKT8 324 aa4.78□□□□□ -1.64
VRK1-203ENST00000555067 PFASO15067 1338 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 PCDH11YQ9BZA8 1340 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 TMEM89A2RUT3 159 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 LRRIQ4A6NIV6 560 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 TMEM150CB9EJG8 249 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 K7EQM0 130 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 TBX19O60806 448 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 LRP3O75074 770 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 CSO75390 466 aaKnown RBP4.77□□□□□ -1.65
VRK1-203ENST00000555067 CSDE1O75534 798 aaKnown RBP4.77□□□□□ -1.65
VRK1-203ENST00000555067 STBD1O95210 358 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 LIPFP07098 398 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 ASNSP08243 561 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 B4GALT1P15291 398 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 RPA2P15927 270 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 ITGA2P17301 1181 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 PAICSP22234 425 aaKnown RBP4.77□□□□□ -1.65
VRK1-203ENST00000555067 JAK1P23458 1154 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 OR1D2P34982 312 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 NKX2-1P43699 371 aaPredicted RBP4.77□□□□□ -1.65
VRK1-203ENST00000555067 FKBP1BP68106 108 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 KRT31Q15323 416 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 PDK4Q16654 411 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 CA9Q16790 459 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 C14orf177Q52M58 125 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 HSP90AB3PQ58FF7 597 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 PMF1Q6P1K2 205 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 ZNF485Q8NCK3 441 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 STKLD1Q8NE28 680 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 DNAAF4Q8WXU2 420 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 SEMA4DQ92854 862 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 DAZLQ92904 295 aaKnown RBP4.77□□□□□ -1.65
VRK1-203ENST00000555067 FBXO32Q969P5 355 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 RFT1Q96AA3 541 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 RPGRIP1Q96KN7 1286 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 F2RL3Q96RI0 385 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 ZNF607Q96SK3 696 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 FTHL17Q9BXU8 183 aa4.77□□□□□ -1.65
VRK1-203ENST00000555067 GON7Q9BXV9 100 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms