RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 RAI14Q9P0K7 980 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 PA2G4Q9UQ80 394 aaKnown RBP1.37□□□□□ -2.19
PRPF39-208ENST00000554785 WDR83OSQ9Y284 106 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 MYO9AB2RTY4 2548 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 DOPEY2Q9Y3R5 2298 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 ZFHX3Q15911 3703 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 DOCK6Q96HP0 2047 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 C2orf16Q68DN1 1984 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 SHROOM3Q8TF72 1996 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 SCN10AQ9Y5Y9 1956 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 LCTP09848 1927 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 TENM4Q6N022 2769 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 ABCA12Q86UK0 2595 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 DOPEY1Q5JWR5 2465 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 CACNA1EQ15878 2313 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 GON4LQ3T8J9 2241 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 MROH7-TTC4A0A0A0MT08 1334 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 TRAV24A0A0B4J272 114 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 A0A0U1RQG5 324 aaPredicted RBP1.37□□□□□ -2.19
PRPF39-208ENST00000554785 A0A1W2PPW3 197 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 FAM170AA1A519 330 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 SLC15A5A6NIM6 579 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 C2orf81A6NN90 581 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 FAM86B1E9PN63 330 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 FAM72CH0Y354 149 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 ARPC2O15144 300 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 MBTPS2O43462 519 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 SNX3O60493 162 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 RPS6KA5O75582 802 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 ATP6AP2O75787 350 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 SIX3O95343 332 aaPredicted RBP1.37□□□□□ -2.19
PRPF39-208ENST00000554785 GSRP00390 522 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 PRB1P04280 392 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 DCNP07585 359 aaKnown RBP1.37□□□□□ -2.19
PRPF39-208ENST00000554785 ZFYP08048 801 aaPredicted RBP1.37□□□□□ -2.19
PRPF39-208ENST00000554785 ASNSP08243 561 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 VIMP08670 466 aaKnown RBP1.37□□□□□ -2.19
PRPF39-208ENST00000554785 FAM86B2P0C5J1 330 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 FAM58BPP0C7Q3 252 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 CFC1BP0CG36 223 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 CFC1P0CG37 223 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 IGHV4-31P0DP07 118 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 ADRA2CP18825 462 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 CDH3P22223 829 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 ANOS1P23352 680 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 CSTF2P33240 577 aaKnown RBP eCLIP1.37□□□□□ -2.19
PRPF39-208ENST00000554785 CTNNB1P35222 781 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 TIMP3P35625 211 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 RGS7P49802 495 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 CLDN15P56746 228 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 GSDMDP57764 484 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 MECOMQ03112 1051 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 GPR17Q13304 367 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 TUBB2AQ13885 445 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 RBM39Q14498 530 aaKnown RBP1.37□□□□□ -2.19
PRPF39-208ENST00000554785 ANGPT1Q15389 498 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 KIAA1644Q3SXP7 199 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 FAM174BQ3ZCQ3 159 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 LACTB2Q53H82 288 aaPredicted RBP1.37□□□□□ -2.19
PRPF39-208ENST00000554785 LRRC73Q5JTD7 316 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 MPP7Q5T2T1 576 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 C20orf194Q5TEA3 1177 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 FAM72AQ5TYM5 149 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 SHEQ5VZ18 495 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 SNRNP48Q6IEG0 339 aaKnown RBP1.37□□□□□ -2.19
PRPF39-208ENST00000554785 FAM72DQ6L9T8 149 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 MFSD6Q6ZSS7 791 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 MSANTD1Q6ZTZ1 278 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 ANKRD33Q7Z3H0 272 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 FAM72BQ86X60 149 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 MMD2Q8IY49 270 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 TIGD4Q8IY51 512 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 SIX6OS1Q8N1H7 587 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 RASGEF1AQ8N9B8 481 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 OR52N5Q8NH56 324 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 OCC1Q8TAD7 63 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 ATP6V1E2Q96A05 226 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 ZNF524Q96C55 264 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 CCDC114Q96M63 670 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 SPATA33Q96N06 139 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 TGS1Q96RS0 853 aaKnown RBP1.37□□□□□ -2.19
PRPF39-208ENST00000554785 INPP5KQ9BT40 448 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 TUBB2BQ9BVA1 445 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 ZMYND12Q9H0C1 365 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 SNX25Q9H3E2 840 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 TLE6Q9H808 572 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 SIX2Q9NPC8 291 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 ZNF624Q9P2J8 865 aaPredicted RBP1.37□□□□□ -2.19
PRPF39-208ENST00000554785 RASAL2Q9UJF2 1139 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 NOL7Q9UMY1 257 aaKnown RBP1.37□□□□□ -2.19
PRPF39-208ENST00000554785 STUB1Q9UNE7 303 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 MMP24Q9Y5R2 645 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 DYNC1LI1Q9Y6G9 523 aaKnown RBP1.37□□□□□ -2.19
PRPF39-208ENST00000554785 CFAP46Q8IYW2 2715 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 MYH6P13533 1939 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 IGSF10Q6WRI0 2623 aa1.37□□□□□ -2.19
PRPF39-208ENST00000554785 FANCMQ8IYD8 2048 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 ASTN1O14525 1302 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 GAKO14976 1311 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 GRIN2DO15399 1336 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms